RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 SAP130Q9H0E3 1048 aa9.12□□□□□ -0.95
CHD8-210ENST00000555962 SP110Q9HB58 689 aa9.12□□□□□ -0.95
CHD8-210ENST00000555962 DTLQ9NZJ0 730 aa9.12□□□□□ -0.95
CHD8-210ENST00000555962 SCHIP1Q9P0W5 487 aaPredicted RBP9.12□□□□□ -0.95
CHD8-210ENST00000555962 LHX3Q9UBR4 397 aa9.12□□□□□ -0.95
CHD8-210ENST00000555962 MBD1Q9UIS9 605 aaPredicted RBP9.12□□□□□ -0.95
CHD8-210ENST00000555962 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.12□□□□□ -0.95
CHD8-210ENST00000555962 PCDHGA2Q9Y5H1 932 aa9.12□□□□□ -0.95
CHD8-210ENST00000555962 WASF2Q9Y6W5 498 aa9.12□□□□□ -0.95
CHD8-210ENST00000555962 CACNA1EQ15878 2313 aa9.12□□□□□ -0.95
CHD8-210ENST00000555962 GVINP1Q7Z2Y8 2422 aa9.12□□□□□ -0.95
CHD8-210ENST00000555962 IGHV1OR15-9A0A0B4J2B8 117 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 A6NJY4 79 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 MIF4GDA9UHW6 222 aaKnown RBP9.11□□□□□ -0.95
CHD8-210ENST00000555962 PLK4O00444 970 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 APOL1O14791 398 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 MCF2LO15068 1137 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 MUSKO15146 869 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 INSIG1O15503 277 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 CST8O60676 142 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 RPP40O75818 363 aaKnown RBP9.11□□□□□ -0.95
CHD8-210ENST00000555962 GSRP00390 522 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 IL1BP01584 269 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 PECAM1P16284 738 aaPredicted RBP9.11□□□□□ -0.95
CHD8-210ENST00000555962 BCKDHBP21953 392 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 GKP32189 559 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 SLC8A1P32418 973 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 P2RY2P41231 377 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 GARSP41250 739 aaKnown RBP9.11□□□□□ -0.95
CHD8-210ENST00000555962 NBL1P41271 181 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 PSMD8P48556 350 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 TPMTP51580 245 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 CCNHP51946 323 aaPredicted RBP9.11□□□□□ -0.95
CHD8-210ENST00000555962 RHOAP61586 193 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 NHLH1Q02575 133 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 CST6Q15828 149 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 PPP2R5EQ16537 467 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 CARD16Q5EG05 197 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 TFDP3Q5H9I0 405 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 TBCELQ5QJ74 424 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 FAM182AQ5T1J6 154 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 MEI1Q5TIA1 1274 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 B4GALNT4Q76KP1 1039 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 ATPAF2Q8N5M1 289 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 AADATQ8N5Z0 425 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 OR6K2Q8NGY2 324 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 PIP4K2CQ8TBX8 421 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.11□□□□□ -0.95
CHD8-210ENST00000555962 GAB3Q8WWW8 586 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 CASKIN2Q8WXE0 1202 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 OR8D1Q8WZ84 308 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 RBM41Q96IZ5 413 aaKnown RBP9.11□□□□□ -0.95
CHD8-210ENST00000555962 EXOC2Q96KP1 924 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 NSMCE3Q96MG7 304 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 OLFM3Q96PB7 478 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 HEMGNQ9BXL5 484 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 MAK16Q9BXY0 300 aaKnown RBP9.11□□□□□ -0.95
CHD8-210ENST00000555962 PABPC3Q9H361 631 aaKnown RBP9.11□□□□□ -0.95
CHD8-210ENST00000555962 FBRSQ9HAH7 460 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 ITM2CQ9NQX7 267 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 TRMT1Q9NXH9 659 aaKnown RBP9.11□□□□□ -0.95
CHD8-210ENST00000555962 USP36Q9P275 1121 aaKnown RBP9.11□□□□□ -0.95
CHD8-210ENST00000555962 SAE1Q9UBE0 346 aaPredicted RBP9.11□□□□□ -0.95
CHD8-210ENST00000555962 HECAQ9UBI9 543 aaPredicted RBP9.11□□□□□ -0.95
CHD8-210ENST00000555962 SERGEFQ9UGK8 458 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 PPM1HQ9ULR3 514 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 CYP8B1Q9UNU6 501 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 HEY1Q9Y5J3 304 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.11□□□□□ -0.95
CHD8-210ENST00000555962 PIEZO1Q92508 2521 aa9.11□□□□□ -0.95
CHD8-210ENST00000555962 TTC24A2A3L6 582 aaPredicted RBP9.1□□□□□ -0.95
CHD8-210ENST00000555962 ALOX15BO15296 676 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 MID1O15344 667 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 SIAH2O43255 324 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 ZSCAN12O43309 604 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 NDUFB5O43674 189 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 RNASEH1O60930 286 aaKnown RBP9.1□□□□□ -0.95
CHD8-210ENST00000555962 GJB3O75712 270 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 IGLV3-19P01714 112 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 DNTTP04053 509 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 CHRNA3P32297 505 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 CNR2P34972 360 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 PTPN7P35236 360 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 DRD3P35462 400 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 RECQLP46063 649 aaPredicted RBP9.1□□□□□ -0.95
CHD8-210ENST00000555962 SNRPD1P62314 119 aaKnown RBP9.1□□□□□ -0.95
CHD8-210ENST00000555962 FOXK2Q01167 660 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 TFDP2Q14188 446 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 LBRQ14739 615 aaKnown RBP9.1□□□□□ -0.95
CHD8-210ENST00000555962 LPAL2Q16609 132 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 MYLK3Q32MK0 819 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 POM121L1PQ3SYA9 428 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 USP39Q53GS9 565 aaKnown RBP9.1□□□□□ -0.95
CHD8-210ENST00000555962 BBS12Q6ZW61 710 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 FAM124AQ86V42 546 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 KBTBD6Q86V97 674 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 PGBD5Q8N414 524 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 RYBPQ8N488 228 aaPredicted RBP9.1□□□□□ -0.95
CHD8-210ENST00000555962 UBL4BQ8N7F7 174 aa9.1□□□□□ -0.95
CHD8-210ENST00000555962 OR2AP1Q8NGE2 309 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms