RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 TPI1P60174 286 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 ARF5P84085 180 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 BNC1Q01954 994 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 TFDP2Q14188 446 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 DPYSL3Q14195 570 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 CA9Q16790 459 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 LONRF2Q1L5Z9 754 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 ACCSLQ4AC99 568 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 AGBL4Q5VU57 503 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 FAM46CQ5VWP2 391 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 PSAPL1Q6NUJ1 521 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 RWDD4Q6NW29 188 aaKnown RBP9.8□□□□□ -0.84
ACTN1-215ENST00000555616 NCEH1Q6PIU2 408 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 MFSD7Q6UXD7 560 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 LINGO4Q6UY18 593 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 PIP4P1Q86T03 277 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 SLC13A5Q86YT5 568 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-215ENST00000555616 RFX6Q8HWS3 928 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 RASGEF1CQ8N431 466 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 HDDC3Q8N4P3 179 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 ATP11CQ8NB49 1132 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 MYRIPQ8NFW9 859 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 OR2A12Q8NGT7 310 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 OR2I1PQ8NGU4 316 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 ACTRT1Q8TDG2 376 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 SNX19Q92543 992 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 CCDC114Q96M63 670 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 KCTD15Q96SI1 283 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-215ENST00000555616 OMDQ99983 421 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 ACE2Q9BYF1 805 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-215ENST00000555616 L2HGDHQ9H9P8 463 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 ATP13A1Q9HD20 1204 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 TM9SF3Q9HD45 589 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 NDFIP2Q9NV92 336 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 DONSONQ9NYP3 566 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 SARDHQ9UL12 918 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 CHD8Q9HCK8 2581 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 hCG_1818297A0A087WSY0 165 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 C3orf70A6NLC5 250 aaPredicted RBP9.79□□□□□ -0.84
ACTN1-215ENST00000555616 RIOK3O14730 519 aaKnown RBP9.79□□□□□ -0.84
ACTN1-215ENST00000555616 FGF10O15520 208 aaPredicted RBP9.79□□□□□ -0.84
ACTN1-215ENST00000555616 PLRG1O43660 514 aaKnown RBP9.79□□□□□ -0.84
ACTN1-215ENST00000555616 OPHN1O60890 802 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 RAMP2O60895 175 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 ZNF821O75541 412 aaPredicted RBP9.79□□□□□ -0.84
ACTN1-215ENST00000555616 CTSLP07711 333 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 CEACAM1P13688 526 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 ZFXP17010 805 aaPredicted RBP9.79□□□□□ -0.84
ACTN1-215ENST00000555616 GEMIN4P57678 1058 aaKnown RBP9.79□□□□□ -0.84
ACTN1-215ENST00000555616 SLC20A2Q08357 652 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 SLC14A1Q13336 389 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 TAZQ16635 292 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 UAP1L1Q3KQV9 507 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 ANKRD20A8PQ5CZ79 823 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 KAZNQ674X7 775 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 IL27RAQ6UWB1 636 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 RFX8Q6ZV50 586 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 CREG2Q8IUH2 290 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 PYROXD2Q8N2H3 581 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 PCDH20Q8N6Y1 951 aaKnown RBP9.79□□□□□ -0.84
ACTN1-215ENST00000555616 CEP112Q8N8E3 955 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 RTL3Q8N8U3 475 aaKnown RBP9.79□□□□□ -0.84
ACTN1-215ENST00000555616 PIP4K2CQ8TBX8 421 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 TSC1Q92574 1164 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 ARHGEF2Q92974 986 aaKnown RBP9.79□□□□□ -0.84
ACTN1-215ENST00000555616 FAF2Q96CS3 445 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 CSPG4P5Q96PW8 444 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 RNF157Q96PX1 679 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 SPON2Q9BUD6 331 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 HEMGNQ9BXL5 484 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 MAGEB5Q9BZ81 275 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 MAGEH1Q9H213 219 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 KDM4CQ9H3R0 1056 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 CATSPERBQ9H7T0 1116 aa9.79□□□□□ -0.84
ACTN1-215ENST00000555616 CWC15Q9P013 229 aaKnown RBP9.79□□□□□ -0.84
ACTN1-215ENST00000555616 CEP192Q8TEP8 1941 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 A0A1B0GVT2 93 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 A0A1W2PPC4 97 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 FAM47DPA6NHR8 397 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 WASH4PA8MWX3 477 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 KRIT1O00522 736 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 APOL1O14791 398 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 GIPC1O14908 333 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 CER1O95813 267 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 CD160O95971 181 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 PRNPP04156 253 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 CD48P09326 243 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 ZNF883P0CG24 379 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 KRT10P13645 584 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 CD59P13987 128 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 EPHB2P29323 1055 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 PMLP29590 882 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 CHRNA3P32297 505 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 ACVRL1P37023 503 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 PPP2CBP62714 309 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 RACK1P63244 317 aaKnown RBP9.78□□□□□ -0.84
ACTN1-215ENST00000555616 PPP2CAP67775 309 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 CNTN1Q12860 1018 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 MMRN1Q13201 1228 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 TEAD4Q15561 434 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms