RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 POU5F1BQ06416 359 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 ZNF672Q499Z4 452 aaPredicted RBP4□□□□□ -1.77
SCFD1-216ENST00000555550 CTXN3Q4LDR2 81 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 SH2D4BQ5SQS7 431 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 H1FNTQ75WM6 255 aaPredicted RBP4□□□□□ -1.77
SCFD1-216ENST00000555550 PATL1Q86TB9 770 aaKnown RBP4□□□□□ -1.77
SCFD1-216ENST00000555550 MUC20Q8N307 709 aaPredicted RBP4□□□□□ -1.77
SCFD1-216ENST00000555550 CLIP4Q8N3C7 705 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 TEX45Q8NA69 505 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 SETD9Q8NE22 299 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 CEP70Q8NHQ1 597 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 SLC39A13Q96H72 371 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 FIZ1Q96SL8 496 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 TTC12Q9H892 705 aaPredicted RBP4□□□□□ -1.77
SCFD1-216ENST00000555550 WDR6Q9NNW5 1121 aaKnown RBP4□□□□□ -1.77
SCFD1-216ENST00000555550 ENTPD7Q9NQZ7 604 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 CNPY2Q9Y2B0 182 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 RIPOR2Q9Y4F9 1068 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 IGHV4-28A0A0C4DH34 117 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 CHL1O00533 1208 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 FAM155BO75949 473 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 SOX30O94993 753 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 CD72P21854 359 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 CAPSQ13938 189 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 TAF5Q15542 800 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 ME3Q16798 604 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 EFHC1Q5JVL4 640 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 CBWD5Q5RIA9 395 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 C10orf62Q5T681 223 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-216ENST00000555550 MOGAT3Q86VF5 341 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 FTSJ3Q8IY81 847 aaKnown RBP3.99□□□□□ -1.77
SCFD1-216ENST00000555550 RBFAQ8N0V3 343 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 RILPL2Q969X0 211 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 RNFT2Q96EX2 444 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 MASTLQ96GX5 879 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 SLC25A33Q9BSK2 321 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 TWSG1Q9GZX9 223 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 ATP8A2Q9NTI2 1148 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 PAM16Q9Y3D7 125 aa3.99□□□□□ -1.77
SCFD1-216ENST00000555550 A0A1B0GVM2 712 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 IRAK2O43187 625 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 ADAP00813 363 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 SERPINC1P01008 464 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 IGLV2-11P01706 119 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 WEE2P0C1S8 567 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 TFPIP10646 304 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 HNF1BP35680 557 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 RPL3P39023 403 aaKnown RBP3.98□□□□□ -1.77
SCFD1-216ENST00000555550 GRK6P43250 576 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 ARSFP54793 590 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 CTTNQ14247 550 aaKnown RBP3.98□□□□□ -1.77
SCFD1-216ENST00000555550 KRT72Q14CN4 511 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 FBXO43Q4G163 708 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 ANO1Q5XXA6 986 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 HIST2H2BCQ6DN03 193 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 RETSATQ6NUM9 610 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 DENND1BQ6P3S1 775 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 GJB7Q6PEY0 223 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 CHD1LQ86WJ1 897 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 C2CD5Q86YS7 1000 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 TCP11L2Q8N4U5 519 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 OR4N2Q8NGD1 307 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 GPT2Q8TD30 523 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 HSPH1Q92598 858 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 RNF183Q96D59 192 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 MVB12BQ9H7P6 319 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 NOD2Q9HC29 1040 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 TCF7L2Q9NQB0 619 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 TMEM51Q9NW97 253 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 IFT80Q9P2H3 777 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-216ENST00000555550 FEM1BQ9UK73 627 aa3.98□□□□□ -1.77
SCFD1-216ENST00000555550 PRR23AA6NEV1 266 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 DHRS4L1P0CG22 281 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 ZNF12P17014 697 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 CTPS1P17812 591 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 CXCR3P49682 368 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 TRAF3Q13114 568 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 BIRC2Q13490 618 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 RPE65Q16518 533 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 DCAF6Q58WW2 860 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 ZNF449Q6P9G9 518 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 MEX3BQ6ZN04 569 aaKnown RBP3.97□□□□□ -1.77
SCFD1-216ENST00000555550 LURAP1LQ8IV03 231 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 TRIM63Q969Q1 353 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 NODALQ96S42 347 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 SPRY4Q9C004 299 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 SDF2L1Q9HCN8 221 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 HDAC6Q9UBN7 1215 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 CD207Q9UJ71 328 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 AGO1Q9UL18 857 aaKnown RBP3.97□□□□□ -1.77
SCFD1-216ENST00000555550 DNAJC16Q9Y2G8 782 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 GDAQ9Y2T3 454 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 COMMD10Q9Y6G5 202 aa3.97□□□□□ -1.77
SCFD1-216ENST00000555550 DYTNA2CJ06 578 aa3.96□□□□□ -1.78
SCFD1-216ENST00000555550 TYW5A2RUC4 315 aaKnown RBP3.96□□□□□ -1.78
SCFD1-216ENST00000555550 B9A039 149 aa3.96□□□□□ -1.78
SCFD1-216ENST00000555550 PEX12O00623 359 aa3.96□□□□□ -1.78
SCFD1-216ENST00000555550 DHX16O60231 1041 aaKnown RBP3.96□□□□□ -1.78
SCFD1-216ENST00000555550 SP1P08047 785 aa3.96□□□□□ -1.78
SCFD1-216ENST00000555550 DCTDP32321 178 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms