RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CAMK1DQ8IU85 385 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 MAP7D3Q8IWC1 876 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 LRRC8AQ8IWT6 810 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 CASKIN2Q8WXE0 1202 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 FOXJ1Q92949 421 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 CINPQ9BW66 212 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-214ENST00000554928 CAPN10Q9HC96 672 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 LUC7LQ9NQ29 371 aaKnown RBP12.52□□□□□ -0.41
SYNE2-214ENST00000554928 DONSONQ9NYP3 566 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 SAE1Q9UBE0 346 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-214ENST00000554928 PACSIN2Q9UNF0 486 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-214ENST00000554928 ZFR2Q9UPR6 939 aaKnown RBP12.52□□□□□ -0.41
SYNE2-214ENST00000554928 CA5BQ9Y2D0 317 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 TBC1D3DA0A087WVF3 549 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 TBC1D3IA0A087WXS9 549 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 TBC1D3EA0A087X179 549 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 TBC1D3KA0A087X1G2 549 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.51□□□□□ -0.41
SYNE2-214ENST00000554928 TBC1D3FA6NER0 549 aaPredicted RBP12.51□□□□□ -0.41
SYNE2-214ENST00000554928 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 TBC1D3LB9A6J9 549 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 FTCDO95954 541 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 PRKCGP05129 697 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 TBC1D3HP0C7X1 549 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 ADRB3P13945 408 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 PECAM1P16284 738 aaPredicted RBP12.51□□□□□ -0.41
SYNE2-214ENST00000554928 SERPINB6P35237 376 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 SEMG2Q02383 582 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 ZNF805Q5CZA5 627 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 WDR45BQ5MNZ6 344 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 KAZNQ674X7 775 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 SEL1L3Q68CR1 1132 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 TBC1D3GQ6DHY5 549 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 TBC1D3CQ6IPX1 549 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 GDPD4Q6W3E5 623 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 KDM7AQ6ZMT4 941 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 SRLQ86TD4 932 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 NT5DC3Q86UY8 548 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 KATNAL2Q8IYT4 538 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 TBC1D3Q8IZP1 549 aaPredicted RBP12.51□□□□□ -0.41
SYNE2-214ENST00000554928 ALG3Q92685 438 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 SLC6A18Q96N87 628 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 LGMNQ99538 433 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 HDAC8Q9BY41 377 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 CAAP1Q9H8G2 361 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 DDX56Q9NY93 547 aaKnown RBP12.51□□□□□ -0.41
SYNE2-214ENST00000554928 HEY1Q9Y5J3 304 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 FADS3Q9Y5Q0 445 aa12.51□□□□□ -0.41
SYNE2-214ENST00000554928 hCG_1818297A0A087WSY0 165 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 A0A1W2PQU0 124 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 LRRC72A6NJI9 287 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 ZNF487B1APH4 448 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 CDX4O14627 284 aaPredicted RBP12.5□□□□□ -0.41
SYNE2-214ENST00000554928 APOL1O14791 398 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 KHNYNO15037 678 aaKnown RBP12.5□□□□□ -0.41
SYNE2-214ENST00000554928 ARHGAP6O43182 974 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 SLC7A4O43246 635 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 RNGTTO60942 597 aaKnown RBP12.5□□□□□ -0.41
SYNE2-214ENST00000554928 WNT1P04628 370 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 TIMP2P16035 220 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 PRLRP16471 622 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 CR2P20023 1033 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 CTNNA1P35221 906 aaKnown RBP12.5□□□□□ -0.41
SYNE2-214ENST00000554928 CSNK1EP49674 416 aaKnown RBP12.5□□□□□ -0.41
SYNE2-214ENST00000554928 PEX5P50542 639 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 NEK3P51956 506 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 KIF5AQ12840 1032 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 PDAP1Q13442 181 aaKnown RBP12.5□□□□□ -0.41
SYNE2-214ENST00000554928 FGL2Q14314 439 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 RFTN1Q14699 578 aaPredicted RBP12.5□□□□□ -0.41
SYNE2-214ENST00000554928 DUOXA1Q1HG43 343 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 AASDHQ4L235 1098 aaPredicted RBP12.5□□□□□ -0.41
SYNE2-214ENST00000554928 SYCP2LQ5T4T6 812 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 SLC23A3Q6PIS1 610 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.5□□□□□ -0.41
SYNE2-214ENST00000554928 TEX26Q8N6G2 289 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 C12orf50Q8NA57 414 aaPredicted RBP12.5□□□□□ -0.41
SYNE2-214ENST00000554928 MAML1Q92585 1016 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 HAUS1Q96CS2 278 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 RMDN1Q96DB5 314 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 ZNF599Q96NL3 588 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 OLFM3Q96PB7 478 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 PSKH2Q96QS6 385 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 MYOCQ99972 504 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 EDEM2Q9BV94 578 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 HEMGNQ9BXL5 484 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 CEP41Q9BYV8 373 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 PCED1AQ9H1Q7 454 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 NOD2Q9HC29 1040 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 TM9SF3Q9HD45 589 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 NT5MQ9NPB1 228 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 FZD3Q9NPG1 666 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 DYRK4Q9NR20 520 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 SEPT3Q9UH03 358 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 PCDHA3Q9Y5H8 950 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 RALGAPA1Q6GYQ0 2036 aa12.5□□□□□ -0.41
SYNE2-214ENST00000554928 PCDH15Q96QU1 1955 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 A0A1B0GVT2 93 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 A0A1W2PPC4 97 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 KCNK1O00180 336 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms