RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 RABIFP47224 123 aa12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 GSCP56915 257 aaPredicted RBP12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 POLR2FP61218 127 aaKnown RBP12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 C1QBPQ07021 282 aaKnown RBP12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 KRT31Q15323 416 aa12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 RWDD4Q6NW29 188 aaKnown RBP12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 LRRC69Q6ZNQ3 347 aa12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 PYROXD2Q8N2H3 581 aa12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 NETO2Q8NC67 525 aa12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 ZNF548Q8NEK5 533 aaPredicted RBP12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 OR2AP1Q8NGE2 309 aa12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 ENOX1Q8TC92 643 aaKnown RBP12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 RAB7BQ96AH8 199 aa12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 HIC2Q96JB3 615 aa12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 UBL7Q96S82 380 aaPredicted RBP12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 C11orf70Q9BRQ4 267 aa12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 DUSP23Q9BVJ7 150 aa12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 TCEAL2Q9H3H9 227 aaPredicted RBP12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 NLRC4Q9NPP4 1024 aa12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 DACH1Q9UI36 760 aa12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 SIK3Q9Y2K2 1263 aa12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 CSNK1G3Q9Y6M4 447 aa12.41□□□□□ -0.42
MTHFD1-207ENST00000554677 CASC3O15234 703 aaKnown RBP12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 RRP8O43159 456 aaKnown RBP12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 GCATO75600 419 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 C1QL1O75973 258 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 MPOP05164 745 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 UGT2B4P06133 528 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 ALPPL2P10696 532 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 TIMP2P16035 220 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 TGM2P21980 687 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 SDC4P31431 198 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 ACTN2P35609 894 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 ETFBP38117 255 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 TLE3Q04726 772 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 CCDC173Q0VFZ6 552 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 SGCGQ13326 291 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 PDE1CQ14123 709 aaPredicted RBP12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 POLD3Q15054 466 aaPredicted RBP12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 ARL13BQ3SXY8 428 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 HS1BP3Q53T59 392 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 ATXN7L2Q5T6C5 722 aaPredicted RBP12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 WDR59Q6PJI9 974 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 PCSK4Q6UW60 755 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 ZSCAN30Q86W11 494 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 PARGQ86W56 976 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 SPACA3Q8IXA5 215 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 FAM172AQ8WUF8 416 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 BAP1Q92560 729 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 NTAN1Q96AB6 310 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 TBC1D31Q96DN5 1066 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 KLHL32Q96NJ5 620 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 NUP62CLQ9H1M0 184 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 USP29Q9HBJ7 922 aa12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 FAM207AQ9NSI2 230 aaPredicted RBP12.4□□□□□ -0.42
MTHFD1-207ENST00000554677 EME2A4GXA9 379 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 KRIT1O00522 736 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 FPGTO14772 594 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 ATXN7O15265 892 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 AQP9O43315 295 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 USP12O75317 370 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 CSO75390 466 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 DXOO77932 396 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 KRT3P12035 628 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 JUNDP17535 347 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 IGFALSP35858 605 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 LSSP48449 732 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 DUSP3P51452 185 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 SNRPD1P62314 119 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 CDKN3Q16667 212 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 DEFB133Q30KQ1 61 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 LRRC73Q5JTD7 316 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 ZCCHC8Q6NZY4 707 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 GUSBP11Q6P575 273 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 TRIM72Q6ZMU5 477 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 PHF13Q86YI8 300 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 RBFAQ8N0V3 343 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 RYBPQ8N488 228 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 DENND6BQ8NEG7 585 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 IFI44Q8TCB0 444 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 SLC39A7Q92504 469 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 ASCL3Q9NQ33 180 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 MBNL1Q9NR56 388 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 LMBRD1Q9NUN5 540 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 SALL4Q9UJQ4 1053 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 MFHAS1Q9Y4C4 1052 aa12.39□□□□□ -0.43
MTHFD1-207ENST00000554677 SCN8AQ9UQD0 1980 aa12.38□□□□□ -0.43
MTHFD1-207ENST00000554677 ZNF462Q96JM2 2506 aa12.38□□□□□ -0.43
MTHFD1-207ENST00000554677 SIGLEC16A6NMB1 481 aa12.38□□□□□ -0.43
MTHFD1-207ENST00000554677 WASH4PA8MWX3 477 aa12.38□□□□□ -0.43
MTHFD1-207ENST00000554677 TK2O00142 265 aa12.38□□□□□ -0.43
MTHFD1-207ENST00000554677 TPP1O14773 563 aa12.38□□□□□ -0.43
MTHFD1-207ENST00000554677 INSIG1O15503 277 aa12.38□□□□□ -0.43
MTHFD1-207ENST00000554677 BUB1O43683 1085 aa12.38□□□□□ -0.43
MTHFD1-207ENST00000554677 MMP20O60882 483 aa12.38□□□□□ -0.43
MTHFD1-207ENST00000554677 RAMP2O60895 175 aa12.38□□□□□ -0.43
MTHFD1-207ENST00000554677 TMCC1O94876 653 aa12.38□□□□□ -0.43
MTHFD1-207ENST00000554677 GEMIN4P57678 1058 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-207ENST00000554677 GABREP78334 506 aa12.38□□□□□ -0.43
MTHFD1-207ENST00000554677 CYTH1Q15438 398 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms