RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 AK5Q9Y6K8 562 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 BDNFP23560 247 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 SAPCD2Q86UD0 394 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 DENND6AQ8IWF6 608 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 PPP3R2Q96LZ3 170 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 EPB41L4BQ9H329 900 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 ARL15Q9NXU5 204 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 SF3B1O75533 1304 aaKnown RBP eCLIP14.08□□□□□ -0.16
VTI1B-204ENST00000554659 BCLAF3A2AJT9 711 aaKnown RBP14.08□□□□□ -0.16
VTI1B-204ENST00000554659 LGALS2P05162 132 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 BPGMP07738 259 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 FGFR1P11362 822 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 CCNB1P14635 433 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 CCNA2P20248 432 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 PERM1Q5SV97 790 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 TRMT11Q7Z4G4 463 aaKnown RBP14.08□□□□□ -0.16
VTI1B-204ENST00000554659 QKIQ96PU8 341 aaKnown RBP eCLIP14.08□□□□□ -0.161e-7■■■■■ 31.4
VTI1B-204ENST00000554659 TMEM109Q9BVC6 243 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 PRDM12Q9H4Q4 367 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 LRRC4CQ9HCJ2 640 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 VPS45Q9NRW7 570 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 WNT10BO00744 389 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 DYRK3O43781 588 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 CNPP09543 421 aaKnown RBP14.08□□□□□ -0.16
VTI1B-204ENST00000554659 SPIRE1Q08AE8 756 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 C10orf107Q8IVU9 208 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 AMER2Q8N7J2 671 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.08□□□□□ -0.16
VTI1B-204ENST00000554659 KLQ9UEF7 1012 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 PLA2G4CQ9UP65 541 aa14.08□□□□□ -0.16
VTI1B-204ENST00000554659 SMIM22K7EJ46 135 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 TSPAN3O60637 253 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 CABYRO75952 493 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 CYP2A6P11509 494 aaPredicted RBP14.07□□□□□ -0.16
VTI1B-204ENST00000554659 UQCRBP14927 111 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 MAPKAPK2P49137 400 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 ARSHQ5FYA8 562 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 ZNF549Q6P9A3 640 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 FAM13CQ8NE31 585 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 ZNF671Q8TAW3 534 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 SLC17A7Q9P2U7 560 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 FAM198AQ9UFP1 575 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 GRIN3BO60391 1043 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 PEX11AO75192 247 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 BMP10O95393 424 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 HOXA10P31260 410 aaPredicted RBP14.07□□□□□ -0.16
VTI1B-204ENST00000554659 CDC42P60953 191 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 BNIP1Q12981 228 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 ACVR2BQ13705 512 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 ECM1Q16610 540 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 CLNKQ7Z7G1 428 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 CHID1Q9BWS9 393 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 CLK4Q9HAZ1 481 aaKnown RBP14.07□□□□□ -0.16
VTI1B-204ENST00000554659 ARL8BQ9NVJ2 186 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 CRNNQ9UBG3 495 aaPredicted RBP14.07□□□□□ -0.16
VTI1B-204ENST00000554659 SNX6Q9UNH7 406 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 WNT7AO00755 349 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 GSC2O15499 205 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 STX11O75558 287 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 ANXA5P08758 320 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 CD86P42081 329 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 CAPSQ13938 189 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 PCBP1Q15365 356 aaKnown RBP eCLIP14.07□□□□□ -0.16
VTI1B-204ENST00000554659 ZC3H12AQ5D1E8 599 aaKnown RBP14.07□□□□□ -0.16
VTI1B-204ENST00000554659 AFTPHQ6ULP2 937 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 UTS2BQ765I0 119 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 ZNF438Q7Z4V0 828 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 CIPCQ9C0C6 399 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 CDT1Q9H211 546 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 DMTF1Q9Y222 760 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 LYPLA2O95372 231 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 TGDSO95455 350 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 CELF3Q5SZQ8 465 aaKnown RBP14.07□□□□□ -0.16
VTI1B-204ENST00000554659 BPIFB6Q8NFQ5 453 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 OR5B17Q8NGF7 314 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 MOSPD2Q8NHP6 518 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 SELENOMQ8WWX9 145 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 P2RX7Q99572 595 aaKnown RBP14.07□□□□□ -0.16
VTI1B-204ENST00000554659 DHX33Q9H6R0 707 aaKnown RBP14.07□□□□□ -0.16
VTI1B-204ENST00000554659 XPR1Q9UBH6 696 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 TRPV2Q9Y5S1 764 aa14.07□□□□□ -0.16
VTI1B-204ENST00000554659 DHRS12A0PJE2 317 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 PRR5-ARHGAP8B1AHC4 643 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 EPHA3P29320 983 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 ARHGAP8P85298 464 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 LGALS3BPQ08380 585 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 NR1D2Q14995 579 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 MAPKAPK3Q16644 382 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 SLC39A12Q504Y0 691 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 TXNDC11Q6PKC3 985 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 SLC44A1Q8WWI5 657 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 LENG1Q96BZ8 264 aaPredicted RBP14.06□□□□□ -0.16
VTI1B-204ENST00000554659 GOT1P17174 413 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 PLD1Q13393 1074 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 PAGE2BQ5JRK9 111 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 SIX5Q8N196 739 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 DNAJB14Q8TBM8 379 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 PLEKHG4BQ96PX9 1271 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 PCDHB18PQ96TA0 734 aa14.06□□□□□ -0.16
VTI1B-204ENST00000554659 SLITRK2Q9H156 845 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms