RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 PRRT3Q5FWE3 981 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 TPRG1LQ5T0D9 272 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 C6orf132Q5T0Z8 1188 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 ARCQ7LC44 396 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 BNIPLQ7Z465 357 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 IRF2BP1Q8IU81 584 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 C1QTNF7Q9BXJ2 289 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 SLC13A1Q9BZW2 595 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 SEMA4CQ9C0C4 833 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 HPCAL4Q9UM19 191 aa24.59■■□□□ 1.53
FOXA1-204ENST00000554607 POP4O95707 220 aaKnown RBP24.58■■□□□ 1.53
FOXA1-204ENST00000554607 GSRP00390 522 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 CYP11B1P15538 503 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 BECN1Q14457 450 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 PERM1Q5SV97 790 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 ESRP1Q6NXG1 681 aaKnown RBP24.58■■□□□ 1.53
FOXA1-204ENST00000554607 FOXR1Q6PIV2 292 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 CRTC1Q6UUV9 634 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 CCDC81Q6ZN84 652 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 CLEC14AQ86T13 490 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 FAM131BQ86XD5 332 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 PHACTR4Q8IZ21 702 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 OR2AP1Q8NGE2 309 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 CENPTQ96BT3 561 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 MED8Q96G25 268 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 CFAP57Q96MR6 1250 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 TMEM59LQ9UK28 342 aa24.58■■□□□ 1.53
FOXA1-204ENST00000554607 CCDC187A0A096LP49 1063 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 GOLGA8SH3BPF8 625 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 KRIT1O00522 736 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 GCATO75600 419 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 TNFSF15O95150 251 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 LSM8O95777 96 aaKnown RBP24.57■■□□□ 1.52
FOXA1-204ENST00000554607 ACVRL1P37023 503 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 MAPKAPK2P49137 400 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 C1orf61Q13536 156 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 SPIDRQ14159 915 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 MAN2A1Q16706 1144 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 ARL13BQ3SXY8 428 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 FAXCQ5TGI0 409 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 SLC35F3Q8IY50 421 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 RBFAQ8N0V3 343 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 OR6K2Q8NGY2 324 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 ARHGEF2Q92974 986 aaKnown RBP24.57■■□□□ 1.52
FOXA1-204ENST00000554607 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.57■■□□□ 1.52
FOXA1-204ENST00000554607 KIAA1468Q9P260 1216 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 OR12D3Q9UGF7 316 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 PADI4Q9UM07 663 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 ACTL7AQ9Y615 435 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 RP1P56715 2156 aa24.57■■□□□ 1.52
FOXA1-204ENST00000554607 UGT2B4P06133 528 aa24.56■■□□□ 1.52
FOXA1-204ENST00000554607 GKP32189 559 aa24.56■■□□□ 1.52
FOXA1-204ENST00000554607 NRG1Q02297 640 aaPredicted RBP24.56■■□□□ 1.52
FOXA1-204ENST00000554607 RAPGEF1Q13905 1077 aa24.56■■□□□ 1.52
FOXA1-204ENST00000554607 DRAP1Q14919 205 aaPredicted RBP24.56■■□□□ 1.52
FOXA1-204ENST00000554607 TPD52L1Q16890 204 aaPredicted RBP24.56■■□□□ 1.52
FOXA1-204ENST00000554607 MYLK3Q32MK0 819 aa24.56■■□□□ 1.52
FOXA1-204ENST00000554607 TTC7BQ86TV6 843 aa24.56■■□□□ 1.52
FOXA1-204ENST00000554607 CCDC3Q9BQI4 270 aa24.56■■□□□ 1.52
FOXA1-204ENST00000554607 MAGEH1Q9H213 219 aa24.56■■□□□ 1.52
FOXA1-204ENST00000554607 TCEAL2Q9H3H9 227 aaPredicted RBP24.56■■□□□ 1.52
FOXA1-204ENST00000554607 GGT7Q9UJ14 662 aa24.56■■□□□ 1.52
FOXA1-204ENST00000554607 ITM2BQ9Y287 266 aa24.56■■□□□ 1.52
FOXA1-204ENST00000554607 COL27A1Q8IZC6 1860 aaPredicted RBP24.55■■□□□ 1.52
FOXA1-204ENST00000554607 TMX2-CTNND1H3BSU7 103 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 AREL1O15033 823 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 YY2O15391 372 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 TM7SF2O76062 418 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 ITGA2BP08514 1039 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 PRKCSHP14314 528 aaPredicted RBP24.55■■□□□ 1.52
FOXA1-204ENST00000554607 RHOQP17081 205 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 BLKP51451 505 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 PPARDQ03181 441 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 RAD51Q06609 339 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 TRNP1Q6NT89 227 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 RWDD4Q6NW29 188 aaKnown RBP24.55■■□□□ 1.52
FOXA1-204ENST00000554607 MACC1Q6ZN28 852 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 VPS36Q86VN1 386 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 FAM114A1Q8IWE2 563 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 FSTL5Q8N475 847 aaPredicted RBP24.55■■□□□ 1.52
FOXA1-204ENST00000554607 SCG3Q8WXD2 468 aaKnown RBP24.55■■□□□ 1.52
FOXA1-204ENST00000554607 KLHL32Q96NJ5 620 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.55■■□□□ 1.52
FOXA1-204ENST00000554607 LRRC61Q9BV99 259 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 DOLKQ9UPQ8 538 aa24.55■■□□□ 1.52
FOXA1-204ENST00000554607 GADD45BO75293 160 aaPredicted RBP24.54■■□□□ 1.52
FOXA1-204ENST00000554607 ADRA1BP35368 520 aa24.54■■□□□ 1.52
FOXA1-204ENST00000554607 IGFALSP35858 605 aa24.54■■□□□ 1.52
FOXA1-204ENST00000554607 EIF4A3P38919 411 aaKnown RBP24.54■■□□□ 1.52
FOXA1-204ENST00000554607 ATP11AP98196 1134 aa24.54■■□□□ 1.52
FOXA1-204ENST00000554607 TAF3Q5VWG9 929 aa24.54■■□□□ 1.52
FOXA1-204ENST00000554607 GDPD4Q6W3E5 623 aa24.54■■□□□ 1.52
FOXA1-204ENST00000554607 CXorf40AQ8TE69 158 aa24.54■■□□□ 1.52
FOXA1-204ENST00000554607 NDST4Q9H3R1 872 aa24.54■■□□□ 1.52
FOXA1-204ENST00000554607 SYNDIG1Q9H7V2 258 aa24.54■■□□□ 1.52
FOXA1-204ENST00000554607 TMEM248Q9NWD8 314 aa24.54■■□□□ 1.52
FOXA1-204ENST00000554607 DNAI1Q9UI46 699 aa24.54■■□□□ 1.52
FOXA1-204ENST00000554607 ZSCAN5CA6NGD5 496 aaPredicted RBP24.53■■□□□ 1.52
FOXA1-204ENST00000554607 TSHRP16473 764 aa24.53■■□□□ 1.52
FOXA1-204ENST00000554607 CLN3Q13286 438 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms