RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 NR1D2Q14995 579 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 BCL2A1Q16548 175 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 DPYSL2Q16555 572 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 CHSY3Q70JA7 882 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 ATXN3LQ9H3M9 355 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 TASP1Q9H6P5 420 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 TRPC7Q9HCX4 862 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 TLL2Q9Y6L7 1015 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 DOCK1Q14185 1865 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 KPNA7A9QM74 516 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 SLC22A2O15244 555 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 GRID2O43424 1007 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 PSME3P61289 254 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 HERC3Q15034 1050 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 MOGQ16653 247 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 CHST13Q8NET6 341 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 FAM110BQ8TC76 370 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 C17orf50Q8WW18 174 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 LPGAT1Q92604 370 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 CCDC97Q96F63 343 aaPredicted RBP17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 VPS33BQ9H267 617 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 NXF3Q9H4D5 531 aaKnown RBP17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 ZDHHC2Q9UIJ5 367 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 RAP2CQ9Y3L5 183 aa17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 GPC6Q9Y625 555 aaPredicted RBP17.12■□□□□ 0.33
PPP4R3A-202ENST00000554390 E7ENX8 843 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 I6L893 689 aaPredicted RBP17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 MDM4O15151 490 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 TSPAN8P19075 237 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 TFEBP19484 476 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 KCNC4Q03721 635 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 IFRD2Q12894 506 aaPredicted RBP17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 ANKRD26P1Q6NSI1 321 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 RNF135Q8IUD6 432 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 CNTD1Q8N815 330 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 SREK1Q8WXA9 508 aaKnown RBP17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 CASP10Q92851 521 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 FAM167AQ96KS9 214 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 PRMT7Q9NVM4 692 aaPredicted RBP17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 SUCOQ9UBS9 1254 aaKnown RBP17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 GNPTGQ9UJJ9 305 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 PTBP2Q9UKA9 531 aaKnown RBP17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 PCDHGA7Q9Y5G6 932 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 COPG1Q9Y678 874 aaKnown RBP17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 SHROOM3Q8TF72 1996 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 POLR2AP24928 1970 aaKnown RBP17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 M0QYT0 321 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 AKAP10O43572 662 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 TIPRLO75663 272 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 PIGNO95427 931 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 DCKP27707 260 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 ADSLP30566 484 aaPredicted RBP17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 ETFBP38117 255 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 GP5P40197 560 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 GARSP41250 739 aaKnown RBP17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 PLK1P53350 603 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 RALGDSQ12967 914 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 RAB39AQ14964 217 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 RGS21Q2M5E4 152 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 TMEM110Q86TL2 294 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 SLC15A4Q8N697 577 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 SCAIQ8N9R8 606 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 ZNF420Q8TAQ5 688 aaPredicted RBP17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 RNF139Q8WU17 664 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 KCTD4Q8WVF5 259 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 KCNN1Q92952 543 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 C12orf42Q96LP6 360 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 DOK1Q99704 481 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 APBA2Q99767 749 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 PIM2Q9P1W9 311 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 CNOT6Q9ULM6 557 aaKnown RBP17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 CDYLQ9Y232 598 aa17.11■□□□□ 0.33
PPP4R3A-202ENST00000554390 KCNU1A8MYU2 1149 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 PRKCQQ04759 706 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 INCA1Q0VD86 236 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 ARL13AQ5H913 290 aaPredicted RBP17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 PITRM1Q5JRX3 1037 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 PPP4R4Q6NUP7 873 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 C4orf22Q6V702 233 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 AFG1LQ8WV93 481 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 SLC45A3Q96JT2 553 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 CYP4F12Q9HCS2 524 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 SMOXQ9NWM0 555 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 GID8Q9NWU2 228 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 C9JVG2 144 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 ZBTB24O43167 697 aaPredicted RBP17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 TSPAN1O60635 241 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 CLASP2O75122 1294 aaKnown RBP17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 OXSR1O95747 527 aaPredicted RBP17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 POLBP06746 335 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 HNRNPLP14866 589 aaKnown RBP eCLIP17.1■□□□□ 0.332e-6■■■□□ 15.1
PPP4R3A-202ENST00000554390 PGAM1P18669 254 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 EDNRBP24530 442 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 NMBRP28336 390 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 SLC7A1P30825 629 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 EPHX2P34913 555 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 ITGADQ13349 1161 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 CTBP1Q13363 440 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 PKDCCQ504Y2 493 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 SLC2A7Q6PXP3 512 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms