RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 MARCKSL1P49006 195 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 RARRES1P49788 294 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 RAD23BP54727 409 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 ARL4CP56559 192 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 PSMC5P62195 406 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 YWHAEP62258 255 aaKnown RBP6.08□□□□□ -1.44
VPS33B-203ENST00000554264 MXRA7P84157 204 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 CAMK1Q14012 370 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 ACAP1Q15027 740 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 PGM5Q15124 567 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 TMED2Q15363 201 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 CCDC6Q16204 474 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 CCDC142Q17RM4 750 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 DNAL1Q4LDG9 190 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 SLFN12LQ6IEE8 588 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 PLEKHA7Q6IQ23 1121 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 TAF2Q6P1X5 1199 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 METTL7BQ6UX53 244 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 PHLDB2Q86SQ0 1253 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 SDCCAG8Q86SQ7 713 aaPredicted RBP6.08□□□□□ -1.44
VPS33B-203ENST00000554264 SLC47A2Q86VL8 602 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 JAZF1Q86VZ6 243 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 ERICH1Q86X53 443 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 PALB2Q86YC2 1186 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 MIB1Q86YT6 1006 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 CMTR2Q8IYT2 770 aaKnown RBP6.08□□□□□ -1.44
VPS33B-203ENST00000554264 GPD1LQ8N335 351 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 GALNT15Q8N3T1 639 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 ALLCQ8N6M5 410 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 NIPA2Q8N8Q9 360 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 SPPL3Q8TCT6 385 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 MGARPQ8TDB4 240 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 SH3RF2Q8TEC5 729 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 ZNF483Q8TF39 744 aaPredicted RBP6.08□□□□□ -1.44
VPS33B-203ENST00000554264 C10orf82Q8WW14 230 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 CPA5Q8WXQ8 436 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 MCUR1Q96AQ8 359 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 DACT3Q96B18 629 aaPredicted RBP6.08□□□□□ -1.44
VPS33B-203ENST00000554264 RMDN2Q96LZ7 410 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 PCDHB18PQ96TA0 734 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 CDCA3Q99618 268 aaPredicted RBP6.08□□□□□ -1.44
VPS33B-203ENST00000554264 SENP7Q9BQF6 1050 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 BTBD10Q9BSF8 475 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 DDX23Q9BUQ8 820 aaKnown RBP6.08□□□□□ -1.44
VPS33B-203ENST00000554264 RNF38Q9H0F5 515 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 MYLK2Q9H1R3 596 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 UNC45AQ9H3U1 944 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 FAM124BQ9H5Z6 455 aaPredicted RBP6.08□□□□□ -1.44
VPS33B-203ENST00000554264 TRIM39Q9HCM9 518 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 VCX3AQ9NNX9 186 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 SLC6A20Q9NP91 592 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 TLR9Q9NR96 1032 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 SETD4Q9NVD3 440 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 MKS1Q9NXB0 559 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 RGL1Q9NZL6 768 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 NDUFA13Q9P0J0 144 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 STX18Q9P2W9 335 aaKnown RBP6.08□□□□□ -1.44
VPS33B-203ENST00000554264 TBX20Q9UMR3 447 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 CNTN6Q9UQ52 1028 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 L3MBTL1Q9Y468 752 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 TELO2Q9Y4R8 837 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 IKBKGQ9Y6K9 419 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 NLRC5Q86WI3 1866 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 CCDC163A0A0D9SF12 145 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 KLHL33A6NCF5 533 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 PRR23AA6NEV1 266 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 ANKRD63C9JTQ0 380 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 E7ESA3 106 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 ENPP3O14638 875 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 WNT9AO14904 365 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 LIASO43766 372 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 TYROBPO43914 113 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 FKBP6O75344 327 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 CIB2O75838 187 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 SNUPNO95149 360 aaKnown RBP6.07□□□□□ -1.44
VPS33B-203ENST00000554264 CSPG5O95196 566 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 GLP2RO95838 553 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 CHRNA1P02708 482 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 LTFP02788 710 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 C8BP07358 591 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 STAG3L1P0CL83 205 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 SRGAP2CP0DJJ0 459 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 KRT5P13647 590 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 PECAM1P16284 738 aaPredicted RBP6.07□□□□□ -1.44
VPS33B-203ENST00000554264 PFKLP17858 780 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 CHKAP35790 457 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 STAT5AP42229 794 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 RAP1GDS1P52306 607 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 ADAM17P78536 824 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 SP2Q02086 613 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 UBE3AQ05086 875 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 SLC34A1Q06495 639 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 CYP24A1Q07973 514 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 PSMD6Q15008 389 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 SURF1Q15526 300 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 TARBP2Q15633 366 aaKnown RBP6.07□□□□□ -1.44
VPS33B-203ENST00000554264 CR1LQ2VPA4 569 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 P3H1Q32P28 736 aa6.07□□□□□ -1.44
VPS33B-203ENST00000554264 TRMT5Q32P41 509 aaKnown RBP6.07□□□□□ -1.44
VPS33B-203ENST00000554264 TFDP3Q5H9I0 405 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms