RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 SFTPA2Q8IWL1 248 aa9.22□□□□□ -0.93
PRKCH-208ENST00000553846 CEP57L1Q8IYX8 460 aa9.22□□□□□ -0.93
PRKCH-208ENST00000553846 FSTL5Q8N475 847 aaPredicted RBP9.22□□□□□ -0.93
PRKCH-208ENST00000553846 ATP11CQ8NB49 1132 aa9.22□□□□□ -0.93
PRKCH-208ENST00000553846 PPP1R16AQ96I34 528 aa9.22□□□□□ -0.93
PRKCH-208ENST00000553846 CCDC114Q96M63 670 aa9.22□□□□□ -0.93
PRKCH-208ENST00000553846 ZNF396Q96N95 335 aaPredicted RBP9.22□□□□□ -0.93
PRKCH-208ENST00000553846 PPP1R9BQ96SB3 815 aa9.22□□□□□ -0.93
PRKCH-208ENST00000553846 C2orf49Q9BVC5 232 aaPredicted RBP9.22□□□□□ -0.93
PRKCH-208ENST00000553846 TRIM62Q9BVG3 475 aa9.22□□□□□ -0.93
PRKCH-208ENST00000553846 CEP44Q9C0F1 390 aa9.22□□□□□ -0.93
PRKCH-208ENST00000553846 THAP9Q9H5L6 903 aa9.22□□□□□ -0.93
PRKCH-208ENST00000553846 DYRK4Q9NR20 520 aa9.22□□□□□ -0.93
PRKCH-208ENST00000553846 MBNL1Q9NR56 388 aaKnown RBP9.22□□□□□ -0.93
PRKCH-208ENST00000553846 DDIT4Q9NX09 232 aa9.22□□□□□ -0.93
PRKCH-208ENST00000553846 FAM13BQ9NYF5 915 aa9.22□□□□□ -0.93
PRKCH-208ENST00000553846 PAXBP1Q9Y5B6 917 aa9.22□□□□□ -0.93
PRKCH-208ENST00000553846 PCDHGA3Q9Y5H0 932 aa9.22□□□□□ -0.93
PRKCH-208ENST00000553846 ZNF106Q9H2Y7 1883 aaKnown RBP9.21□□□□□ -0.93
PRKCH-208ENST00000553846 PDZD2O15018 2839 aa9.21□□□□□ -0.93
PRKCH-208ENST00000553846 DRGXA6NNA5 263 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 SLC16A3O15427 465 aaKnown RBP9.21□□□□□ -0.94
PRKCH-208ENST00000553846 PAGE1O75459 146 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 SLC2A3P11169 496 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 CCL4P13236 92 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 LIFP15018 202 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 PFKFB1P16118 471 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 PNLIPP16233 465 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 ACADSBP45954 432 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 CCNHP51946 323 aaPredicted RBP9.21□□□□□ -0.94
PRKCH-208ENST00000553846 KRT83P78385 493 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 ARF5P84085 180 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 LRMPQ12912 555 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 EFHC2Q5JST6 749 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 OGFOD3Q6PK18 319 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 SETD3Q86TU7 594 aaPredicted RBP9.21□□□□□ -0.94
PRKCH-208ENST00000553846 PCDH20Q8N6Y1 951 aaKnown RBP9.21□□□□□ -0.94
PRKCH-208ENST00000553846 ZSCAN1Q8NBB4 408 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 OR7D4Q8NG98 312 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 FUBP1Q96AE4 644 aaKnown RBP9.21□□□□□ -0.94
PRKCH-208ENST00000553846 KREMEN1Q96MU8 473 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 EDEM3Q9BZQ6 932 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 SLC13A1Q9BZW2 595 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 SPRY4Q9C004 299 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 MUC3BQ9H195 1237 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 SEMA6CQ9H3T2 930 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 SYNDIG1Q9H7V2 258 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 SIRPGQ9P1W8 387 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 IPO11Q9UI26 975 aaKnown RBP9.21□□□□□ -0.94
PRKCH-208ENST00000553846 FARP1Q9Y4F1 1045 aaPredicted RBP9.21□□□□□ -0.94
PRKCH-208ENST00000553846 PCDHB4Q9Y5E5 795 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 RNF215Q9Y6U7 377 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 ANKRD36A6QL64 1941 aa9.21□□□□□ -0.94
PRKCH-208ENST00000553846 C16orf96A6NNT2 1141 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 ENO4A6NNW6 628 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 STMND1H3BQB6 276 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 TOR1BO14657 336 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 GLI1P08151 1106 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 EPB41P11171 864 aaKnown RBP9.2□□□□□ -0.94
PRKCH-208ENST00000553846 TFE3P19532 575 aaPredicted RBP9.2□□□□□ -0.94
PRKCH-208ENST00000553846 GKP32189 559 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 EIF4A3P38919 411 aaKnown RBP9.2□□□□□ -0.94
PRKCH-208ENST00000553846 RECQLP46063 649 aaPredicted RBP9.2□□□□□ -0.94
PRKCH-208ENST00000553846 ME1P48163 572 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 PMS1P54277 932 aaKnown RBP9.2□□□□□ -0.94
PRKCH-208ENST00000553846 NUCB2P80303 420 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 B4GALNT1Q00973 533 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 GCNT1Q02742 428 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 PPARDQ03181 441 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 PDCLQ13371 301 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 PTK2BQ14289 1009 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 HLTFQ14527 1009 aaKnown RBP eCLIP9.2□□□□□ -0.94
PRKCH-208ENST00000553846 NR1D2Q14995 579 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 NCAPHQ15003 741 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 IRF4Q15306 451 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 DCAF17Q5H9S7 520 aaPredicted RBP9.2□□□□□ -0.94
PRKCH-208ENST00000553846 OLFML1Q6UWY5 402 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 ZNF438Q7Z4V0 828 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 C17orf82Q86X59 251 aaPredicted RBP9.2□□□□□ -0.94
PRKCH-208ENST00000553846 ARHGEF19Q8IW93 802 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 PLPP6Q8IY26 295 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 SMYD4Q8IYR2 804 aaPredicted RBP9.2□□□□□ -0.94
PRKCH-208ENST00000553846 OR6C4Q8NGE1 309 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 RNF34Q969K3 372 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 RAB7BQ96AH8 199 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 RBM15Q96T37 977 aaKnown RBP eCLIP9.2□□□□□ -0.94
PRKCH-208ENST00000553846 CMKLR1Q99788 373 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 HEPHQ9BQS7 1158 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 CDH19Q9H159 772 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 FAM204AQ9H8W3 233 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 PIGVQ9NUD9 493 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 ASNSD1Q9NWL6 643 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 ARHGEF38Q9NXL2 777 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 GULP1Q9UBP9 304 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 USP25Q9UHP3 1055 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 RCOR1Q9UKL0 485 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 GPR34Q9UPC5 381 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 SNX10Q9Y5X0 201 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 ACTL7AQ9Y615 435 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 SETD2Q9BYW2 2564 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms