RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 LRRC45Q96CN5 670 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 FAF2Q96CS3 445 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 OTUB2Q96DC9 234 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 TMA16Q96EY4 203 aaKnown RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 FCRL2Q96LA5 508 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 CSPG4P5Q96PW8 444 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 PEBP4Q96S96 227 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 KRT12Q99456 494 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 AP1M1Q9BXS5 423 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 LRRC3Q9BY71 257 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 FAM129AQ9BZQ8 928 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ZYG11BQ9C0D3 744 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 RNF32Q9H0A6 362 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 RNF38Q9H0F5 515 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 TSPYL1Q9H0U9 437 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 PRO3102Q9H379 93 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 CCSER2Q9H7U1 834 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 KIF9Q9HAQ2 790 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 SP110Q9HB58 689 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ZNF334Q9HCZ1 680 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 FAM114A2Q9NRY5 505 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 TDP1Q9NUW8 608 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ARGLU1Q9NWB6 273 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 GPATCH2LQ9NWQ4 482 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 CWC15Q9P013 229 aaKnown RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 PCYOX1Q9UHG3 505 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ZNF148Q9UQR1 794 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 MRPS23Q9Y3D9 190 aaKnown RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ZFP37Q9Y6Q3 630 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 NUP205Q92621 2012 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 BCLAF3A2AJT9 711 aaKnown RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 FAM221AA4D161 298 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 FITM1A5D6W6 292 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 C2orf78A6NCI8 922 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 ARHGAP42A6NI28 874 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 DRGXA6NNA5 263 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 UPK3BL1B0FP48 263 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 UPK3BL2E5RIL1 263 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 E9PAM4 449 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 ETV2O00321 342 aaPredicted RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 PSMD3O43242 534 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 MSI1O43347 362 aaKnown RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CLDN11O75508 207 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 TADA3O75528 432 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 RFPL2O75678 378 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 NEBLO76041 1014 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 STC2O76061 302 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 OLFM2O95897 454 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 MOCS2O96007 188 aaPredicted RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 IGLV3-27P01718 113 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CKMP06732 381 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 ITGAVP06756 1048 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 RBP3P10745 1247 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 TCF4P15884 667 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 GOT1P17174 413 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 TACR2P21452 398 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 IL4RP24394 825 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CCNCP24863 283 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CORO1AP31146 461 aaKnown RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 HOXC13P31276 330 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 GTF2F1P35269 517 aaKnown RBP eCLIP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 ETFBP38117 255 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 MTHFRP42898 656 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 MAPKAPK2P49137 400 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 NDST2P52849 883 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 DRG2P55039 364 aaKnown RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CDH4P55283 916 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 EIF3EP60228 445 aaKnown RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 DYNLT1P63172 113 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CYP4F8P98187 520 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 DR1Q01658 176 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 OTUD4Q01804 1114 aaKnown RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CAV1Q03135 178 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 C2orf54Q08AI8 447 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 SEMA3BQ13214 749 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 ZNF177Q13360 481 aaPredicted RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 AUHQ13825 339 aaKnown RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 KCNC3Q14003 757 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 PPP1R7Q15435 360 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CA9Q16790 459 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 C5orf22Q49AR2 442 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 MAP9Q49MG5 647 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 MPPE1Q53F39 396 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 RAB6CQ53S08 254 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 TCEAL5Q5H9L2 206 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 MS4A13Q5J8X5 152 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 RARS2Q5T160 578 aaKnown RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 TMCO4Q5TGY1 634 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 DAB2IPQ5VWQ8 1189 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 TIGD7Q6NT04 549 aaPredicted RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 RWDD4Q6NW29 188 aaKnown RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 AADACL2Q6P093 401 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 C1orf228Q6PIY5 440 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CEP128Q6ZU80 1094 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CYP4V2Q6ZWL3 525 aaPredicted RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 GRASPQ7Z6J2 395 aaPredicted RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 ADGRD2Q7Z7M1 963 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 GPR149Q86SP6 731 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 TMEM150AQ86TG1 271 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms