RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 PPP2CAP67775 309 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 IRX4P78413 519 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 GDPD4Q6W3E5 623 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 DAAM2Q86T65 1068 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 KATNAL2Q8IYT4 538 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 TSEN2Q8NCE0 465 aaKnown RBP18.7■□□□□ 0.58
CPSF2-202ENST00000553427 SNX19Q92543 992 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 EDEM2Q9BV94 578 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 ZDHHC5Q9C0B5 715 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 GOLPH3Q9H4A6 298 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 GRPEL1Q9HAV7 217 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 DLL3Q9NYJ7 618 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 DMTF1Q9Y222 760 aa18.7■□□□□ 0.58
CPSF2-202ENST00000553427 TBC1D3DA0A087WVF3 549 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 TBC1D3IA0A087WXS9 549 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 TBC1D3EA0A087X179 549 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 TBC1D3KA0A087X1G2 549 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 TBC1D3FA6NER0 549 aaPredicted RBP18.69■□□□□ 0.58
CPSF2-202ENST00000553427 C16orf96A6NNT2 1141 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 TBC1D3LB9A6J9 549 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 TBC1D3HP0C7X1 549 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 ZFXP17010 805 aaPredicted RBP18.69■□□□□ 0.58
CPSF2-202ENST00000553427 PI4KAP42356 2102 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 GRIA4P48058 902 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 SUOXP51687 545 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 AFF3P51826 1226 aaKnown RBP18.69■□□□□ 0.58
CPSF2-202ENST00000553427 AP1S1P61966 158 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 GBE1Q04446 702 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 SLC10A7Q0GE19 358 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 KIF5AQ12840 1032 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 IFI16Q16666 785 aaKnown RBP18.69■□□□□ 0.58
CPSF2-202ENST00000553427 ODF2Q5BJF6 829 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 TBC1D3GQ6DHY5 549 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 TBC1D3CQ6IPX1 549 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 TIGD7Q6NT04 549 aaPredicted RBP18.69■□□□□ 0.58
CPSF2-202ENST00000553427 FBXL19Q6PCT2 694 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 TBC1D3Q8IZP1 549 aaPredicted RBP18.69■□□□□ 0.58
CPSF2-202ENST00000553427 BBS5Q8N3I7 341 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 TEX26Q8N6G2 289 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 PLD5Q8N7P1 536 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 LRRC57Q8N9N7 239 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 NSMCE1Q8WV22 266 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 MAML1Q92585 1016 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 HDAC11Q96DB2 347 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 EXOC2Q96KP1 924 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 ZNF641Q96N77 438 aaPredicted RBP18.69■□□□□ 0.58
CPSF2-202ENST00000553427 MIR1-1HGQ9H1L0 117 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 TM9SF3Q9HD45 589 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 RXFP3Q9NSD7 469 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 DTLQ9NZJ0 730 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 CDV3Q9UKY7 258 aaKnown RBP18.69■□□□□ 0.58
CPSF2-202ENST00000553427 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.69■□□□□ 0.58
CPSF2-202ENST00000553427 DUSP10Q9Y6W6 482 aa18.69■□□□□ 0.58
CPSF2-202ENST00000553427 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.68■□□□□ 0.58
CPSF2-202ENST00000553427 APOL1O14791 398 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 SLC30A4O14863 429 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 ARHGAP6O43182 974 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 GDF9O60383 454 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 SYPP08247 313 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 ENGP17813 658 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 CDKN2BP42772 138 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 RGRP47804 291 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 RACK1P63244 317 aaKnown RBP18.68■□□□□ 0.58
CPSF2-202ENST00000553427 HNRNPDQ14103 355 aaKnown RBP18.68■□□□□ 0.58
CPSF2-202ENST00000553427 ZNF235Q14590 738 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 RALGPS1Q5JS13 557 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 MFSD7Q6UXD7 560 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 SRLQ86TD4 932 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 PRPF39Q86UA1 669 aaKnown RBP18.68■□□□□ 0.58
CPSF2-202ENST00000553427 HORMAD1Q86X24 394 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.68■□□□□ 0.58
CPSF2-202ENST00000553427 SPOCK2Q92563 424 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 ZNF830Q96NB3 372 aaPredicted RBP18.68■□□□□ 0.58
CPSF2-202ENST00000553427 KLHL32Q96NJ5 620 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 MGME1Q9BQP7 344 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 DESI2Q9BSY9 194 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 ATP13A3Q9H7F0 1226 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 AMACRQ9UHK6 382 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 FADS3Q9Y5Q0 445 aa18.68■□□□□ 0.58
CPSF2-202ENST00000553427 GOLGA6L3A6NEY3 463 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 ARHGAP33O14559 1287 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 AREL1O15033 823 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 MUSKO15146 869 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 INSIG1O15503 277 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 TSPAN6O43657 245 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 CR2P20023 1033 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 CCNCP24863 283 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 CTNNA1P35221 906 aaKnown RBP18.67■□□□□ 0.58
CPSF2-202ENST00000553427 ABL2P42684 1182 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 SLC10A2Q12908 348 aaPredicted RBP18.67■□□□□ 0.58
CPSF2-202ENST00000553427 TEAD4Q15561 434 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 RSPO4Q2I0M5 234 aaPredicted RBP18.67■□□□□ 0.58
CPSF2-202ENST00000553427 TMEM259Q4ZIN3 620 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 SETMARQ53H47 684 aaPredicted RBP18.67■□□□□ 0.58
CPSF2-202ENST00000553427 STPG1Q5TH74 334 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 MARC1Q5VT66 337 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 KIAA1161Q6NSJ0 714 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 BRAT1Q6PJG6 821 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 EXD1Q8NHP7 514 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 ECHDC3Q96DC8 303 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms