RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 CLDN2P57739 230 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 YWHAZP63104 245 aaKnown RBP4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 DDR1Q08345 913 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 PKP1Q13835 747 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 SHBQ15464 509 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 CDC37Q16543 378 aaPredicted RBP4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 HIST2H2ACQ16777 129 aaPredicted RBP4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 EDRF1Q3B7T1 1238 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 C5orf22Q49AR2 442 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 USP39Q53GS9 565 aaKnown RBP4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 C10orf76Q5T2E6 689 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 DHRS13Q6UX07 377 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 VSTM1Q6UX27 236 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 CRELD2Q6UXH1 353 aaPredicted RBP4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 SERPINA13PQ6UXR4 307 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 NAPRTQ6XQN6 538 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 FAM47EQ6ZV65 393 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 TRIM74Q86UV6 250 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 TRIM73Q86UV7 250 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 KBTBD6Q86V97 674 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 DHX40Q8IX18 779 aaKnown RBP4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 POMGNT2Q8NAT1 580 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 POGLUT1Q8NBL1 392 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 OR4N2Q8NGD1 307 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 SGCDQ92629 289 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 ATP6V1E2Q96A05 226 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 SAT2Q96F10 170 aaPredicted RBP4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 PDLIM2Q96JY6 352 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 TUBB6Q9BUF5 446 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 KLHL4Q9C0H6 718 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 NUAK2Q9H093 628 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 ZWILCHQ9H900 591 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 MLXIPLQ9NP71 852 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 TFCP2L1Q9NZI6 479 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 FOXJ2Q9P0K8 574 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 WDR35Q9P2L0 1181 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 RAPGEFL1Q9UHV5 662 aa4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 PTRH2Q9Y3E5 179 aaKnown RBP4.24□□□□□ -1.73
LSM6P2-201ENST00000552208 FAM237AA0A1B0GTK4 181 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 FAM157AC9JC47 383 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 SEC14L5O43304 696 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 AKR1A1P14550 325 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 SLC2A4P14672 509 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 IFNAR1P17181 557 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 PTPN2P17706 415 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 TRIM21P19474 475 aaKnown RBP4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 CIITAP33076 1130 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 PTGS2P35354 604 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 CENPAP49450 140 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 MFAP4P55083 255 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 F2RL1P55085 397 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 HOXA4Q00056 320 aaPredicted RBP4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 TAP1Q03518 808 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 KPNB1Q14974 876 aaKnown RBP4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 CDSNQ15517 529 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 AWAT1Q58HT5 328 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 ZNF628Q5EBL2 1059 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 KIAA1755Q5JYT7 1200 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 FAM171A1Q5VUB5 890 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 TMEM268Q5VZI3 342 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 TMEM65Q6PI78 240 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 ZNF804AQ7Z570 1209 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 ZNF713Q8N859 430 aaPredicted RBP4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 CXorf38Q8TB03 319 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 PROKR1Q8TCW9 393 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 WIPF2Q8TF74 440 aaPredicted RBP4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 DUSP19Q8WTR2 217 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 FAR1Q8WVX9 515 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 LRRC59Q96AG4 307 aaKnown RBP4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 REPS1Q96D71 796 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 ARHGEF26Q96DR7 871 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 SPATA17Q96L03 361 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 COQ10AQ96MF6 247 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 DESI2Q9BSY9 194 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 MRPL1Q9BYD6 325 aaKnown RBP4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 KRTAP9-3Q9BYQ3 159 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 ANKRD2Q9GZV1 360 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 ZCCHC4Q9H5U6 513 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 RETREG1Q9H6L5 497 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 ABCF3Q9NUQ8 709 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 SETD4Q9NVD3 440 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 TAB2Q9NYJ8 693 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 OGFRQ9NZT2 677 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 TRPV2Q9Y5S1 764 aa4.23□□□□□ -1.73
LSM6P2-201ENST00000552208 UTYO14607 1347 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 FLT1P17948 1338 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 A0A1W2PR77 199 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 EBAG9O00559 213 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 SLC7A4O43246 635 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 TBCAO75347 108 aaKnown RBP4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 PSMD10O75832 226 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 ESRRBO95718 433 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 MT-CYBP00156 380 aaPredicted RBP4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 IL1AP01583 271 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 AFPP02771 609 aaKnown RBP4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 HKR1P10072 659 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 TGFB3P10600 412 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 PON1P27169 355 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 CAMPP49913 170 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms