RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 SLC11A2P49281 568 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 HTRA3P83110 453 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 SLC12A1Q13621 1099 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 TRIM60Q495X7 471 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 HECTD3Q5T447 861 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 TMCO4Q5TGY1 634 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 NEPROQ6NW34 567 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 RFWD3Q6PCD5 774 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 KLHDC10Q6PID8 442 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 ATG14Q6ZNE5 492 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 CFAP52Q8N1V2 620 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 TOX2Q96NM4 488 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 MID2Q9UJV3 735 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 FBXO5Q9UKT4 447 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 FAM95CA0A1B0GW59 222 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 A8MUI8 341 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 PHGDHO43175 533 aaKnown RBP14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 COCHO43405 550 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 CCDC22O60826 627 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 ABLIM3O94929 683 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 PAPSS2O95340 614 aaPredicted RBP14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 SLC35E2BP0CK96 405 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 COL6A2P12110 1019 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 CALB2P22676 271 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 ARRB2P32121 409 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 CD151P48509 253 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 MNAT1P51948 309 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 SIRPB2Q5JXA9 342 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 CNKSR3Q6P9H4 555 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 KIAA0408Q6ZU52 694 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 LONP2Q86WA8 852 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 SREK1Q8WXA9 508 aaKnown RBP14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 TSNARE1Q96NA8 513 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 ZNF599Q96NL3 588 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 NACA2Q9H009 215 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 MAGEH1Q9H213 219 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 STN1Q9H668 368 aaKnown RBP14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 TASP1Q9H6P5 420 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 PDFQ9HBH1 243 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 CD248Q9HCU0 757 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 HSFX1Q9UBD0 423 aa14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 UXTQ9UBK9 157 aaPredicted RBP14.16□□□□□ -0.14
RAB3IP-216ENST00000552199 H2AFYO75367 372 aaKnown RBP14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 ATXN1LP0C7T5 689 aaKnown RBP14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 RAB10P61026 200 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 ZNF470Q6ECI4 717 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 MFSD6LQ8IWD5 586 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 ZNF461Q8TAF7 563 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 RDH11Q8TC12 318 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 CALML6Q8TD86 181 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 PLD4Q96BZ4 506 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 RILPQ96NA2 401 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 SEMA3CQ99985 751 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 EBF4Q9BQW3 602 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 ACE2Q9BYF1 805 aaPredicted RBP14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 POLR1EQ9GZS1 481 aaKnown RBP14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 PNPOQ9NVS9 261 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 ARMCX1Q9P291 453 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 RUVBL2Q9Y230 463 aaKnown RBP14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 ACOT9Q9Y305 439 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 PCDHB12Q9Y5F1 795 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 ZFP37Q9Y6Q3 630 aaPredicted RBP14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 COL4A6Q14031 1691 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 MROH6A6NGR9 719 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 CAPN14A8MX76 684 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 TMEM114B3SHH9 223 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 MUSKO15146 869 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 TRIM13O60858 407 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 SOD2P04179 222 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 ESRRAP11474 423 aaPredicted RBP14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 STMN1P16949 149 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 CRABP2P29373 138 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 AVPR1AP37288 418 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 PGGT1BP53609 377 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 CDH4P55283 916 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 GNA12Q03113 381 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 ZNF235Q14590 738 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 RABGAP1LQ5R372 815 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 TPGS2Q68CL5 300 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 NAPRTQ6XQN6 538 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 CEP97Q8IW35 865 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 TMEM151AQ8N4L1 468 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 ZNF784Q8NCA9 323 aaPredicted RBP14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 GABPB2Q8TAK5 448 aaPredicted RBP14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 KCTD4Q8WVF5 259 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 VWCEQ96DN2 955 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 MYRFLQ96LU7 910 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 BTBD10Q9BSF8 475 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 FAM96AQ9H5X1 160 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 OXSMQ9NWU1 459 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 TRPM5Q9NZQ8 1165 aa14.15□□□□□ -0.14
RAB3IP-216ENST00000552199 A0A0D9SEW6 157 aa14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 H3BNC9 293 aa14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 SERPINA6P08185 405 aa14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 SBK3P0C264 359 aa14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 ALOX15P16050 662 aaPredicted RBP14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 HOXD9P28356 352 aaPredicted RBP14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 DSG1Q02413 1049 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms