RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 POLD3Q15054 466 aaPredicted RBP14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 EXOC3L4Q17RC7 722 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 ARL13BQ3SXY8 428 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 ZNF805Q5CZA5 627 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 TPRG1LQ5T0D9 272 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 CREBRFQ8IUR6 639 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 PLPP6Q8IY26 295 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 SLC35F3Q8IY50 421 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 PHACTR4Q8IZ21 702 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 RBFAQ8N0V3 343 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 SCG3Q8WXD2 468 aaKnown RBP14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 ISG20Q96AZ6 181 aaKnown RBP14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 LIN37Q96GY3 246 aaPredicted RBP14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 HAPLN3Q96S86 360 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 TBCBQ99426 244 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 LRRC61Q9BV99 259 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 C1QTNF7Q9BXJ2 289 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 FAM117AQ9C073 453 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 PDCL3Q9H2J4 239 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 ATXN7L1Q9ULK2 861 aaPredicted RBP14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 PADI4Q9UM07 663 aa14.42□□□□□ -0.1
CHMP1A-210ENST00000551981 PMS2P1A4D2B8 440 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 BIN1O00499 593 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 TOR1BO14657 336 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 PLD2O14939 933 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 GCATO75600 419 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 GJB6O95452 261 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 SCNN1AP37088 669 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 ABL2P42684 1182 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 BPIFB4P59827 614 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 C1orf61Q13536 156 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 FAM102AQ5T9C2 384 aaPredicted RBP14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 FAXCQ5TGI0 409 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 XKR5Q6UX68 686 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 MACC1Q6ZN28 852 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 SLC47A2Q86VL8 602 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 DRC7Q8IY82 874 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 FSTL5Q8N475 847 aaPredicted RBP14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 TMEM35BQ8NCS4 154 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 OSBPL1AQ9BXW6 950 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 TM6SF2Q9BZW4 377 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 STRADBQ9C0K7 418 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 TCEAL2Q9H3H9 227 aaPredicted RBP14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 TMPRSS4Q9NRS4 437 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 ZNF212Q9UDV6 495 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 DOLKQ9UPQ8 538 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 PCDHGA7Q9Y5G6 932 aa14.41□□□□□ -0.1
CHMP1A-210ENST00000551981 PTPN13Q12923 2485 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 GTPBP10A4D1E9 387 aaKnown RBP14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 KRIT1O00522 736 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 YY2O15391 372 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 GSRP00390 522 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 CSRP3P50461 194 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 BLKP51451 505 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 PDX1P52945 283 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 SNRPD1P62314 119 aaKnown RBP14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 APBA1Q02410 837 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 PPARDQ03181 441 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 USP53Q70EK8 1073 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 VPS36Q86VN1 386 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 JAMLQ86YT9 394 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 FBXO39Q8N4B4 442 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 ARL10Q8N8L6 244 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 OR6K2Q8NGY2 324 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 CENPTQ96BT3 561 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 C18orf8Q96DM3 657 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 GFM1Q96RP9 751 aaKnown RBP14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 EPB41L5Q9HCM4 733 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 PLCB1Q9NQ66 1216 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 PPARGC1AQ9UBK2 798 aaKnown RBP14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 GGT7Q9UJ14 662 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 HPCAL4Q9UM19 191 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 ITM2BQ9Y287 266 aa14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 TLN1Q9Y490 2541 aaKnown RBP14.4□□□□□ -0.1
CHMP1A-210ENST00000551981 NTN3O00634 580 aaPredicted RBP14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 TM7SF2O76062 418 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 POP4O95707 220 aaKnown RBP14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 UGT2B4P06133 528 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 ALPIP09923 528 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 TSHRP16473 764 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 PON1P27169 355 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 CLCN1P35523 988 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 IGFALSP35858 605 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 GABRB2P47870 512 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 NFATC3Q12968 1075 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 ELOCQ15369 112 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 LVRNQ6Q4G3 990 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 RAB11FIP2Q7L804 512 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 MSANTD4Q8NCY6 345 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 OR2AP1Q8NGE2 309 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 CXorf40AQ8TE69 158 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 ARHGEF2Q92974 986 aaKnown RBP14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 ARHGAP9Q9BRR9 750 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 RETREG1Q9H6L5 497 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 GULP1Q9UBP9 304 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 DNAJC12Q9UKB3 198 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 AHCTF1Q8WYP5 2266 aa14.39□□□□□ -0.11
CHMP1A-210ENST00000551981 CHD5Q8TDI0 1954 aa14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 FOXN3O00409 490 aaPredicted RBP14.38□□□□□ -0.11
CHMP1A-210ENST00000551981 AREL1O15033 823 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms