RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PLA2G2FQ9BZM2 168 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 ZCWPW1Q9H0M4 648 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 NT5C3AQ9H0P0 336 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 FAM49AQ9H0Q0 323 aaPredicted RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 CHMP4BQ9H444 224 aaKnown RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 ZBTB26Q9HCK0 441 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 OBP2BQ9NPH6 170 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 RXFP3Q9NSD7 469 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 MRPS18AQ9NVS2 196 aaKnown RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 BARHL2Q9NY43 387 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 SPG21Q9NZD8 308 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 CTTNBP2NLQ9P2B4 639 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 HSFX1Q9UBD0 423 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 DKK4Q9UBT3 224 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 CAPN11Q9UMQ6 739 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 R4GN57 208 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 KIAA1671Q9BY89 1806 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 FNDC1Q4ZHG4 1894 aaPredicted RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 DENND4AQ7Z401 1863 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 TENM4Q6N022 2769 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 A0A087WZ62 844 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 KRTAP23-1A1A580 65 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 ANTXRLA6NF34 631 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 hCG_1984214I3L0E3 225 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 IPO5O00410 1097 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 SYT5O00445 386 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 RNASET2O00584 256 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 IFIT3O14879 490 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 ZNF185O15231 689 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 PRICKLE3O43900 615 aaPredicted RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 RPS6KA5O75582 802 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 RFPL2O75678 378 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 SUN1O94901 812 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 LYPLA2O95372 231 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 CXCL14O95715 111 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 LMNAP02545 664 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 CHRNB1P11230 501 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 EGR1P18146 543 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 SP100P23497 879 aaPredicted RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 GABRB3P28472 473 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 HOXA9P31269 272 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 PRKAR1BP31321 381 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 ATICP31939 592 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 SERPINF1P36955 418 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 CCR2P41597 374 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 MTHFRP42898 656 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 RPS9P46781 194 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 NPTX2P47972 431 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 SCNN1GP51170 649 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 ZNF134P52741 427 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 RCAN1P53805 252 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 POLE2P56282 527 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 NLRP11P59045 1033 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 NTHL1P78549 312 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 DMWDQ09019 674 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 ST3GAL1Q11201 340 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 MYO1EQ12965 1108 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 DYRK1AQ13627 763 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 PUM1Q14671 1186 aaKnown RBP eCLIP2.57□□□□□ -26e-6■■■■□ 24.2
CPSF6-207ENST00000551516 PRKD1Q15139 912 aaPredicted RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 MAPKAPK3Q16644 382 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 PFKFB3Q16875 520 aaPredicted RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 IMMTQ16891 758 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 SLC5A9Q2M3M2 681 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 ZNF750Q32MQ0 723 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 CD300EQ496F6 205 aaPredicted RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 Q4G0T1 1027 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 PDCD4Q53EL6 469 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 RABL3Q5HYI8 236 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 ARHGAP40Q5TG30 622 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 FAXCQ5TGI0 409 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 ERICH6BQ5W0A0 696 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 ICE2Q659A1 982 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 MRNIPQ6NTE8 343 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 ARMC6Q6NXE6 501 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 KIAA0408Q6ZU52 694 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 MICALCLQ6ZW33 695 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 USP49Q70CQ1 688 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 GATAD2AQ86YP4 633 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 C1orf210Q8IVY1 113 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 CCDC117Q8IWD4 279 aaPredicted RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 SUGP1Q8IWZ8 645 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 CACNA2D3Q8IZS8 1091 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 GALNT15Q8N3T1 639 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 TMEM132CQ8N3T6 1108 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 LRRC71Q8N4P6 559 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 BEST2Q8NFU1 509 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 EXOC6Q8TAG9 804 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 ITFG1Q8TB96 612 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 CPT1CQ8TCG5 803 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 BPIFB1Q8TDL5 484 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 IPO4Q8TEX9 1081 aaKnown RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 ZNF483Q8TF39 744 aaPredicted RBP2.57□□□□□ -2
CPSF6-207ENST00000551516 HDAC7Q8WUI4 952 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 RSPH1Q8WYR4 309 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 RUBCNQ92622 972 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 TBC1D20Q96BZ9 403 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 C18orf8Q96DM3 657 aa2.57□□□□□ -2
CPSF6-207ENST00000551516 BOD1Q96IK1 185 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms