RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SEPT5Q99719 369 aaPredicted RBP6□□□□□ -1.45
SCAF11-213ENST00000550629 SMOQ99835 787 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 TTLL2Q9BWV7 592 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 ISCUQ9H1K1 167 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 DEF6Q9H4E7 631 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 FBXO44Q9H4M3 255 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 NHEJ1Q9H9Q4 299 aaPredicted RBP6□□□□□ -1.45
SCAF11-213ENST00000550629 ACP6Q9NPH0 428 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 CNGB3Q9NQW8 809 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 MAN1C1Q9NR34 630 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 TMEM51Q9NW97 253 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 MTMR10Q9NXD2 777 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 UXTQ9UBK9 157 aaPredicted RBP6□□□□□ -1.45
SCAF11-213ENST00000550629 NENFQ9UMX5 172 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 CLUHO75153 1309 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 A0A087X0T9 212 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 A0A0G2JNJ9 132 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 SLC38A8A6NNN8 435 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 EIF3CLB5ME19 914 aaKnown RBP5.99□□□□□ -1.45
SCAF11-213ENST00000550629 PER2O15055 1255 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 ARHGAP6O43182 974 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 RTN2O75298 545 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 NDUFA10O95299 355 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 IPO7O95373 1038 aaKnown RBP5.99□□□□□ -1.45
SCAF11-213ENST00000550629 ZBED1O96006 694 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 SPATA31D3P0C874 917 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 FAM228BP0C875 321 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 SKILP12757 684 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 FOSL2P15408 326 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 CYLC1P35663 651 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-213ENST00000550629 KIF11P52732 1056 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 HMGA2P52926 109 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 SLC5A3P53794 718 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 CACNA2D1P54289 1103 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 GSCP56915 257 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-213ENST00000550629 RAC3P60763 192 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 TWF1Q12792 350 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 SPA17Q15506 151 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 TBR1Q16650 682 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 TAF3Q5VWG9 929 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 SNX30Q5VWJ9 437 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 NAA35Q5VZE5 725 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 TRIM68Q6AZZ1 485 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 ACAD10Q6JQN1 1059 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 ANKRD54Q6NXT1 300 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 PMF1Q6P1K2 205 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 SPATA31D4Q6ZUB0 917 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 DENND5BQ6ZUT9 1274 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 TOGARAM2Q6ZUX3 1019 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 UBE2R2Q712K3 238 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-213ENST00000550629 MON1BQ7L1V2 547 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 ARCQ7LC44 396 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 RBM23Q86U06 439 aaKnown RBP5.99□□□□□ -1.45
SCAF11-213ENST00000550629 TAX1BP1Q86VP1 789 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 MON1AQ86VX9 555 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 ERICH1Q86X53 443 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 TMEM139Q8IV31 216 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 PASD1Q8IV76 773 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 SIX6OS1Q8N1H7 587 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 SYNPOQ8N3V7 929 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 ZNF276Q8N554 614 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 ZMIZ2Q8NF64 920 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 VN1R2Q8NFZ6 395 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 UBA3Q8TBC4 463 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 CALML6Q8TD86 181 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 ZNF707Q96C28 371 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-213ENST00000550629 C18orf8Q96DM3 657 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 ZNF512Q96ME7 567 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-213ENST00000550629 GUCD1Q96NT3 240 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 SLITRK1Q96PX8 696 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 CPXM1Q96SM3 734 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 PCDHB18PQ96TA0 734 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 EIF3CQ99613 913 aaKnown RBP5.99□□□□□ -1.45
SCAF11-213ENST00000550629 CHP1Q99653 195 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.99□□□□□ -1.45
SCAF11-213ENST00000550629 SYNCQ9H7C4 482 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 LRRC4Q9HBW1 653 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 TMEM30AQ9NV96 361 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 ASNSD1Q9NWL6 643 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 CLIC5Q9NZA1 410 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 WDR35Q9P2L0 1181 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 Q9UFV3 132 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 LCMT1Q9UIC8 334 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 INTUQ9ULD6 942 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 SCML2Q9UQR0 700 aa5.99□□□□□ -1.45
SCAF11-213ENST00000550629 CCDC195A0A1B0GUA6 201 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 ANKRD62A6NC57 917 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 E5RJQ4 531 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 CBX4O00257 560 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 TULP2O00295 520 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 ZNF197O14709 1029 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 FOXS1O43638 330 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 SOAT2O75908 522 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 BEST1O76090 585 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 GLP2RO95838 553 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 CALCAP01258 141 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 FTLP02792 175 aaPredicted RBP5.98□□□□□ -1.45
SCAF11-213ENST00000550629 PTMAP06454 111 aaKnown RBP5.98□□□□□ -1.45
SCAF11-213ENST00000550629 PLEKP08567 350 aaPredicted RBP5.98□□□□□ -1.45
SCAF11-213ENST00000550629 ZDHHC11BP0C7U3 371 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms