RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 SEMA3CQ99985 751 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 NSUN3Q9H649 340 aaKnown RBP12.73□□□□□ -0.37
CACNB3-217ENST00000550483 NKIRAS1Q9NYS0 192 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 GDE1Q9NZC3 331 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 LMCD1Q9NZU5 365 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 ZFATQ9P243 1243 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 TCAF1Q9Y4C2 921 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 OR51B4Q9Y5P0 310 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 NYNRINQ9P2P1 1898 aaKnown RBP12.72□□□□□ -0.37
CACNB3-217ENST00000550483 BRWD1Q9NSI6 2320 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-217ENST00000550483 F5H423 210 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-217ENST00000550483 PER2O15055 1255 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 INSIG1O15503 277 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 PRPF4O43172 522 aaKnown RBP eCLIP12.72□□□□□ -0.37
CACNB3-217ENST00000550483 PMPCBO75439 489 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 ZMPSTE24O75844 475 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 NDST3O95803 873 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 C1QAP02745 245 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 BRAFP15056 766 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 GJA1P17302 382 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 CR2P20023 1033 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 HADHAP40939 763 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 CSKP41240 450 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 NRIP1P48552 1158 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 SERPINH1P50454 418 aaKnown RBP12.72□□□□□ -0.37
CACNB3-217ENST00000550483 SGSHP51688 502 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 AP1S1P61966 158 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 CDK18Q07002 472 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 SLC1A5Q15758 541 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 SLC5A9Q2M3M2 681 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 STXBP5Q5T5C0 1151 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 DENND5AQ6IQ26 1287 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 ADGRD2Q7Z7M1 963 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 MPP5Q8N3R9 675 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 PPM1NQ8N819 430 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 CALML6Q8TD86 181 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 SCG3Q8WXD2 468 aaKnown RBP12.72□□□□□ -0.37
CACNB3-217ENST00000550483 SPOCK2Q92563 424 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 ZNF669Q96BR6 464 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-217ENST00000550483 TCEAL4Q96EI5 215 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 ALG14Q96F25 216 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 ZNF419Q96HQ0 510 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-217ENST00000550483 CPNE1Q99829 537 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 ADGRE3Q9BY15 652 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 C11orf16Q9NQ32 467 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 SCUBE2Q9NQ36 999 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 SPHK2Q9NRA0 654 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 UBP1Q9NZI7 540 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 HCN4Q9Y3Q4 1203 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 DENND4CQ5VZ89 1909 aa12.72□□□□□ -0.37
CACNB3-217ENST00000550483 HELZP42694 1942 aaKnown RBP12.71□□□□□ -0.37
CACNB3-217ENST00000550483 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-217ENST00000550483 A0A1W2PQ67 120 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 FAM47DPA6NHR8 397 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 ATP9BO43861 1147 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 USP12O75317 370 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 TMCC1O94876 653 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 CSPG5O95196 566 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 MT-ND3P03897 115 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 MMP2P08253 660 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 GP5P40197 560 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 POLD2P49005 469 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 CSE1LP55060 971 aaKnown RBP12.71□□□□□ -0.37
CACNB3-217ENST00000550483 RPL26P61254 145 aaKnown RBP12.71□□□□□ -0.37
CACNB3-217ENST00000550483 ARF5P84085 180 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 PDE1BQ01064 536 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 DSC2Q02487 901 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 NIPAL4Q0D2K0 466 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 GRM3Q14832 879 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 SKIV2LQ15477 1246 aaKnown RBP12.71□□□□□ -0.37
CACNB3-217ENST00000550483 PLEKHG6Q3KR16 790 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 TMEM31Q5JXX7 168 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 GRTP1Q5TC63 336 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 KIAA0930Q6ICG6 404 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-217ENST00000550483 TIFABQ6ZNK6 161 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 SPRED2Q7Z698 418 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 GPR149Q86SP6 731 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 RBM23Q86U06 439 aaKnown RBP12.71□□□□□ -0.37
CACNB3-217ENST00000550483 RASSF3Q86WH2 238 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 ARID3BQ8IVW6 561 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-217ENST00000550483 SRRM1Q8IYB3 904 aaKnown RBP12.71□□□□□ -0.37
CACNB3-217ENST00000550483 PGBD5Q8N414 524 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 EFHBQ8N7U6 833 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.71□□□□□ -0.37
CACNB3-217ENST00000550483 ACMSDQ8TDX5 336 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 IRF7Q92985 503 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 ISG20Q96AZ6 181 aaKnown RBP12.71□□□□□ -0.37
CACNB3-217ENST00000550483 C19orf43Q9BQ61 176 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 SELENOSQ9BQE4 189 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 FAM167BQ9BTA0 163 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 CEP44Q9C0F1 390 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 TRABDQ9H4I3 376 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 TRPV4Q9HBA0 871 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 PPANQ9NQ55 473 aaKnown RBP12.71□□□□□ -0.37
CACNB3-217ENST00000550483 ABCB8Q9NUT2 735 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 INTS9Q9NV88 658 aaKnown RBP12.71□□□□□ -0.37
CACNB3-217ENST00000550483 MKS1Q9NXB0 559 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 HACD3Q9P035 362 aa12.71□□□□□ -0.37
CACNB3-217ENST00000550483 TBK1Q9UHD2 729 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms