RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 GPD1P21695 349 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 CLCN6P51797 869 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 CAMK2BQ13554 666 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 CCDC14Q49A88 953 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 ARSIQ5FYB1 569 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 IQCHQ86VS3 1027 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 PDCD7Q8N8D1 485 aaKnown RBP13.66□□□□□ -0.22
NUP188-211ENST00000550219 TPCN2Q8NHX9 752 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 KLHDC7BQ96G42 594 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 PPP1R16AQ96I34 528 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 CNPY3Q9BT09 278 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 ZYG11BQ9C0D3 744 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 ERVMER34-1Q9H9K5 563 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 TMEM51Q9NW97 253 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 LCMT1Q9UIC8 334 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 ANAPC7Q9UJX3 599 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 PCDHGA1Q9Y5H4 931 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 CHD6Q8TD26 2715 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 IGLV3-10A0A075B6K4 115 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 DRGXA6NNA5 263 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 MYO1FO00160 1098 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 FFAR2O15552 330 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 CCP110O43303 1012 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 LEFTY1O75610 366 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 AKT2P31751 481 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 RXRGP48443 463 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 SERPINH1P50454 418 aaKnown RBP13.65□□□□□ -0.22
NUP188-211ENST00000550219 CLDN2P57739 230 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 CCDC15Q0P6D6 951 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 OVGP1Q12889 678 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 COL9A2Q14055 689 aaPredicted RBP13.65□□□□□ -0.22
NUP188-211ENST00000550219 PIGHQ14442 188 aaPredicted RBP13.65□□□□□ -0.22
NUP188-211ENST00000550219 ACAP1Q15027 740 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 C15orf59Q2T9L4 293 aaPredicted RBP13.65□□□□□ -0.22
NUP188-211ENST00000550219 RAB6CQ53S08 254 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 SEL1L3Q68CR1 1132 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 RWDD4Q6NW29 188 aaKnown RBP13.65□□□□□ -0.22
NUP188-211ENST00000550219 DPY19L3Q6ZPD9 716 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 ERN2Q76MJ5 926 aaKnown RBP13.65□□□□□ -0.22
NUP188-211ENST00000550219 STRADAQ7RTN6 431 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 PTAR1Q7Z6K3 402 aaPredicted RBP13.65□□□□□ -0.22
NUP188-211ENST00000550219 PDZD3Q86UT5 571 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 TMPRSS12Q86WS5 348 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 HORMAD1Q86X24 394 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 RYBPQ8N488 228 aaPredicted RBP13.65□□□□□ -0.22
NUP188-211ENST00000550219 NXPE2Q96DL1 559 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 BTBD6Q96KE9 485 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 HAPLN3Q96S86 360 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 TM6SF2Q9BZW4 377 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 RAB6CQ9H0N0 254 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 ZDHHC6Q9H6R6 413 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 CAAP1Q9H8G2 361 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 TRMT1Q9NXH9 659 aaKnown RBP13.65□□□□□ -0.22
NUP188-211ENST00000550219 IP6K2Q9UHH9 426 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 FCF1Q9Y324 198 aaKnown RBP13.65□□□□□ -0.22
NUP188-211ENST00000550219 ACTL7AQ9Y615 435 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 PKD1L2Q7Z442 2459 aa13.65□□□□□ -0.22
NUP188-211ENST00000550219 ADAMTS20P59510 1910 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 ZZEF1O43149 2961 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 ILVBLA1L0T0 632 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 GOLGA6L9A6NEM1 432 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 USP27XA6NNY8 438 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 PROSCO94903 275 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 HNRNPA2B1P22626 353 aaKnown RBP13.64□□□□□ -0.23
NUP188-211ENST00000550219 SDC4P31431 198 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 MAN1A1P33908 653 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 NOP2P46087 812 aaKnown RBP13.64□□□□□ -0.23
NUP188-211ENST00000550219 CCNHP51946 323 aaPredicted RBP13.64□□□□□ -0.23
NUP188-211ENST00000550219 NEK3P51956 506 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 ARF5P84085 180 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 DAB2P98082 770 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 GNA12Q03113 381 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 IFI16Q16666 785 aaKnown RBP13.64□□□□□ -0.23
NUP188-211ENST00000550219 ZNF284Q2VY69 593 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 RETSATQ6NUM9 610 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 C11orf63Q6NUN7 778 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 KANSL1Q7Z3B3 1105 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 SLFN11Q7Z7L1 901 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 ARFGAP1Q8N6T3 406 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 LRRC57Q8N9N7 239 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 TMEM145Q8NBT3 493 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 TMIEQ8NEW7 156 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 OR13H1Q8NG92 308 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 OR6K2Q8NGY2 324 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 LRIG1Q96JA1 1093 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 C1orf74Q96LT6 269 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 LZTFL1Q9NQ48 299 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 DKK4Q9UBT3 224 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 GUCA1BQ9UMX6 200 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 ZFR2Q9UPR6 939 aaKnown RBP13.64□□□□□ -0.23
NUP188-211ENST00000550219 WASF2Q9Y6W5 498 aa13.64□□□□□ -0.23
NUP188-211ENST00000550219 FAM208BQ5VWN6 2430 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 MACROD2A1Z1Q3 448 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 GRID2IPA4D2P6 1211 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 BUB1O43683 1085 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 SIGLEC6O43699 453 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 BUB1BO60566 1050 aaPredicted RBP13.63□□□□□ -0.23
NUP188-211ENST00000550219 CKMT2P17540 419 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 PSMA2P25787 234 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 ACVRL1P37023 503 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms