RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 NT5MQ9NPB1 228 aa22.82■■□□□ 1.24
BRF1-216ENST00000550208 RBM22Q9NW64 420 aaKnown RBP eCLIP22.82■■□□□ 1.24
BRF1-216ENST00000550208 GON4LQ3T8J9 2241 aa22.82■■□□□ 1.24
BRF1-216ENST00000550208 PIGNO95427 931 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 CCNB1P14635 433 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 ITPKAP23677 461 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 ITGB7P26010 798 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 MAOBP27338 520 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 PTPN7P35236 360 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 CETN2P41208 172 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 ADPRHP54922 357 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 TAS2R38P59533 333 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 MAXP61244 160 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 CCDC173Q0VFZ6 552 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 AP1B1Q10567 949 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 CCDC6Q16204 474 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 DCAF12L1Q5VU92 463 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 LYSMD4Q5XG99 296 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 BZW1Q7L1Q6 419 aaKnown RBP22.81■■□□□ 1.24
BRF1-216ENST00000550208 BBS5Q8N3I7 341 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 PIGKQ92643 395 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 P3H4Q92791 437 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 FOXJ1Q92949 421 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 FATE1Q969F0 183 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 PPP1R16AQ96I34 528 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 OSBPL1AQ9BXW6 950 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 EFR3BQ9Y2G0 817 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 VPS13AQ96RL7 3174 aa22.81■■□□□ 1.24
BRF1-216ENST00000550208 TBC1D3DA0A087WVF3 549 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 TBC1D3IA0A087WXS9 549 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 TBC1D3EA0A087X179 549 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 TBC1D3KA0A087X1G2 549 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 BCLAF3A2AJT9 711 aaKnown RBP22.8■■□□□ 1.24
BRF1-216ENST00000550208 TBC1D3FA6NER0 549 aaPredicted RBP22.8■■□□□ 1.24
BRF1-216ENST00000550208 LRRC72A6NJI9 287 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 C16orf96A6NNT2 1141 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 TBC1D3LB9A6J9 549 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 SLC7A4O43246 635 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 PLRG1O43660 514 aaKnown RBP22.8■■□□□ 1.24
BRF1-216ENST00000550208 JCHAINP01591 159 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 TBC1D3HP0C7X1 549 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 CR2P20023 1033 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 HSPA9P38646 679 aaKnown RBP22.8■■□□□ 1.24
BRF1-216ENST00000550208 TBC1D3GQ6DHY5 549 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 TBC1D3CQ6IPX1 549 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 PARS2Q7L3T8 475 aaKnown RBP22.8■■□□□ 1.24
BRF1-216ENST00000550208 CYP2U1Q7Z449 544 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 CAMK1DQ8IU85 385 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 TBC1D3Q8IZP1 549 aaPredicted RBP22.8■■□□□ 1.24
BRF1-216ENST00000550208 OR2T34Q8NGX1 318 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 ALS2CR12Q96Q35 445 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 MGME1Q9BQP7 344 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 SUV39H2Q9H5I1 410 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 TMEM74BQ9NUR3 256 aa22.8■■□□□ 1.24
BRF1-216ENST00000550208 TRMT1Q9NXH9 659 aaKnown RBP22.8■■□□□ 1.24
BRF1-216ENST00000550208 KCNK1O00180 336 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 PPP1R12AO14974 1030 aaPredicted RBP22.79■■□□□ 1.24
BRF1-216ENST00000550208 ZSCAN12O43309 604 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 FSBPO95073 299 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 NEK3P51956 506 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 ITKQ08881 620 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 SPEM2Q0P670 501 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 CCDC15Q0P6D6 951 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 GRM3Q14832 879 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 RPS6KA1Q15418 735 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 KIAA0895LQ68EN5 471 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 FBXL19Q6PCT2 694 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 ZC3H18Q86VM9 953 aaKnown RBP22.79■■□□□ 1.24
BRF1-216ENST00000550208 RGL4Q8IZJ4 473 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 UBE2Q2Q8WVN8 375 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 NUDCD1Q96RS6 583 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 TUBGCP5Q96RT8 1024 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 HINFPQ9BQA5 517 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 BRD8Q9H0E9 1235 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 PCED1AQ9H1Q7 454 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 NOD2Q9HC29 1040 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 SCUBE2Q9NQ36 999 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 PCDHGA5Q9Y5G8 931 aa22.79■■□□□ 1.24
BRF1-216ENST00000550208 C10orf142B7Z368 130 aa22.78■■□□□ 1.24
BRF1-216ENST00000550208 ADRB3P13945 408 aa22.78■■□□□ 1.24
BRF1-216ENST00000550208 TIMP2P16035 220 aa22.78■■□□□ 1.24
BRF1-216ENST00000550208 SYCP2LQ5T4T6 812 aa22.78■■□□□ 1.24
BRF1-216ENST00000550208 CCDC181Q5TID7 509 aa22.78■■□□□ 1.24
BRF1-216ENST00000550208 TRIM58Q8NG06 486 aa22.78■■□□□ 1.24
BRF1-216ENST00000550208 BIRC7Q96CA5 298 aa22.78■■□□□ 1.24
BRF1-216ENST00000550208 ZNF641Q96N77 438 aaPredicted RBP22.78■■□□□ 1.24
BRF1-216ENST00000550208 IL12RB2Q99665 862 aa22.78■■□□□ 1.24
BRF1-216ENST00000550208 KDM4CQ9H3R0 1056 aa22.78■■□□□ 1.24
BRF1-216ENST00000550208 SMOC1Q9H4F8 434 aa22.78■■□□□ 1.24
BRF1-216ENST00000550208 DKK3Q9UBP4 350 aa22.78■■□□□ 1.24
BRF1-216ENST00000550208 PILRBQ9UKJ0 227 aa22.78■■□□□ 1.24
BRF1-216ENST00000550208 PYCARDQ9ULZ3 195 aa22.78■■□□□ 1.24
BRF1-216ENST00000550208 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.78■■□□□ 1.24
BRF1-216ENST00000550208 ATXN2Q99700 1313 aaKnown RBP22.78■■□□□ 1.24
BRF1-216ENST00000550208 MEI4A8MW99 385 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 APOC4-APOC2K7ER74 178 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 TJP3O95049 919 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 APOC2P02655 101 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 HLA-DQB2P05538 268 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 IGHV4-34P06331 123 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms