RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 SLC22A18ASQ8N1D0 253 aa16.57■□□□□ 0.24
VPS29-207ENST00000549970 CASKIN2Q8WXE0 1202 aa16.57■□□□□ 0.24
VPS29-207ENST00000549970 RAB7BQ96AH8 199 aa16.57■□□□□ 0.24
VPS29-207ENST00000549970 VOPP1Q96AW1 172 aa16.57■□□□□ 0.24
VPS29-207ENST00000549970 ZNF653Q96CK0 615 aa16.57■□□□□ 0.24
VPS29-207ENST00000549970 EXOC2Q96KP1 924 aa16.57■□□□□ 0.24
VPS29-207ENST00000549970 BMFQ96LC9 184 aa16.57■□□□□ 0.24
VPS29-207ENST00000549970 TRIM7Q9C029 511 aa16.57■□□□□ 0.24
VPS29-207ENST00000549970 TTYH3Q9C0H2 523 aa16.57■□□□□ 0.24
VPS29-207ENST00000549970 DHX35Q9H5Z1 703 aaKnown RBP16.57■□□□□ 0.24
VPS29-207ENST00000549970 KLHL11Q9NVR0 708 aa16.57■□□□□ 0.24
VPS29-207ENST00000549970 CNOT8Q9UFF9 292 aaKnown RBP16.57■□□□□ 0.24
VPS29-207ENST00000549970 PCSK1NQ9UHG2 260 aa16.57■□□□□ 0.24
VPS29-207ENST00000549970 RALYQ9UKM9 306 aaKnown RBP16.57■□□□□ 0.24
VPS29-207ENST00000549970 HS3ST3A1Q9Y663 406 aa16.57■□□□□ 0.24
VPS29-207ENST00000549970 POM121BA6NF01 834 aa16.56■□□□□ 0.24
VPS29-207ENST00000549970 EEF2KO00418 725 aaKnown RBP16.56■□□□□ 0.24
VPS29-207ENST00000549970 TSPAN6O43657 245 aa16.56■□□□□ 0.24
VPS29-207ENST00000549970 GZMAP12544 262 aa16.56■□□□□ 0.24
VPS29-207ENST00000549970 SGCGQ13326 291 aa16.56■□□□□ 0.24
VPS29-207ENST00000549970 NR1I3Q14994 352 aa16.56■□□□□ 0.24
VPS29-207ENST00000549970 INO80DQ53TQ3 878 aaPredicted RBP16.56■□□□□ 0.24
VPS29-207ENST00000549970 ZNF542PQ5EBM4 170 aa16.56■□□□□ 0.24
VPS29-207ENST00000549970 KYAT3Q6YP21 454 aaKnown RBP16.56■□□□□ 0.24
VPS29-207ENST00000549970 UMODL1-AS1Q8N2C9 162 aa16.56■□□□□ 0.24
VPS29-207ENST00000549970 SLC25A45Q8N413 288 aa16.56■□□□□ 0.24
VPS29-207ENST00000549970 ARFGAP1Q8N6T3 406 aa16.56■□□□□ 0.24
VPS29-207ENST00000549970 CELF6Q96J87 481 aaKnown RBP16.56■□□□□ 0.24
VPS29-207ENST00000549970 PEBP4Q96S96 227 aa16.56■□□□□ 0.24
VPS29-207ENST00000549970 SNRNP25Q9BV90 132 aaKnown RBP16.56■□□□□ 0.24
VPS29-207ENST00000549970 CBX8Q9HC52 389 aa16.56■□□□□ 0.24
VPS29-207ENST00000549970 UCKL1Q9NWZ5 548 aa16.56■□□□□ 0.24
VPS29-207ENST00000549970 MYO1AQ9UBC5 1043 aa16.56■□□□□ 0.24
VPS29-207ENST00000549970 UBA2Q9UBT2 640 aaPredicted RBP16.56■□□□□ 0.24
VPS29-207ENST00000549970 KNTC1P50748 2209 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 TMEM191CA6NGB0 347 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 TRIM38O00635 465 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 INSIG1O15503 277 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 FFAR2O15552 330 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 SPINT1O43278 529 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 SIGLEC6O43699 453 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 RNF8O76064 485 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 C1SP09871 688 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 DGKAP23743 735 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 HTR7P34969 479 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 ERMARDQ5T6L9 678 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 TTC7BQ86TV6 843 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 LUZP1Q86V48 1076 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 ZSCAN30Q86W11 494 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 TMPRSS12Q86WS5 348 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 FAM174AQ8TBP5 190 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 TSC1Q92574 1164 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 ARHGEF26Q96DR7 871 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 KCTD15Q96SI1 283 aaPredicted RBP16.55■□□□□ 0.24
VPS29-207ENST00000549970 NCAPGQ9BPX3 1015 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 C1QTNF2Q9BXJ5 285 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 LRRC19Q9H756 370 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 DNAJC28Q9NX36 388 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 DONSONQ9NYP3 566 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 LHX3Q9UBR4 397 aa16.55■□□□□ 0.24
VPS29-207ENST00000549970 TRABD2BA6NFA1 517 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 J3KR12 359 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 FPGTO14772 594 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 AREL1O15033 823 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 DAPK3O43293 454 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 PRPSAP2O60256 369 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 PIAS2O75928 621 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 PIGNO95427 931 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 CKMT2P17540 419 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 MIPP30301 263 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 RABIFP47224 123 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 NDST2P52849 883 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 TPM4P67936 248 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 FANCCQ00597 558 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 CAMK2BQ13554 666 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 CYTH1Q15438 398 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 PROX2Q3B8N5 592 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 HS1BP3Q53T59 392 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 TDRD12Q587J7 1177 aaKnown RBP16.54■□□□□ 0.24
VPS29-207ENST00000549970 PPP6R3Q5H9R7 873 aaPredicted RBP16.54■□□□□ 0.24
VPS29-207ENST00000549970 KDM7AQ6ZMT4 941 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 DCP2Q8IU60 420 aaKnown RBP16.54■□□□□ 0.24
VPS29-207ENST00000549970 FNIP1Q8TF40 1166 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 KLF6Q99612 283 aaPredicted RBP16.54■□□□□ 0.24
VPS29-207ENST00000549970 EDEM3Q9BZQ6 932 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 SLC39A8Q9C0K1 460 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 PDFQ9HBH1 243 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 SCINQ9Y6U3 715 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 CHD6Q8TD26 2715 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 PKD1L2Q7Z442 2459 aa16.54■□□□□ 0.24
VPS29-207ENST00000549970 ACACAQ13085 2346 aa16.53■□□□□ 0.24
VPS29-207ENST00000549970 ARHGAP42A6NI28 874 aa16.53■□□□□ 0.24
VPS29-207ENST00000549970 EIF3CLB5ME19 914 aaKnown RBP16.53■□□□□ 0.24
VPS29-207ENST00000549970 MMP20O60882 483 aa16.53■□□□□ 0.24
VPS29-207ENST00000549970 CDK4P11802 303 aa16.53■□□□□ 0.24
VPS29-207ENST00000549970 JUPP14923 745 aa16.53■□□□□ 0.24
VPS29-207ENST00000549970 ITIH2P19823 946 aa16.53■□□□□ 0.24
VPS29-207ENST00000549970 HNF1BP35680 557 aa16.53■□□□□ 0.24
VPS29-207ENST00000549970 PAPOLAP51003 745 aaKnown RBP16.53■□□□□ 0.24
VPS29-207ENST00000549970 DAB2P98082 770 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms