RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 OR12D3Q9UGF7 316 aa5.13□□□□□ -1.59
AC078880.2-201ENST00000547948 TPX2Q9ULW0 747 aaKnown RBP5.13□□□□□ -1.59
AC078880.2-201ENST00000547948 SNX24Q9Y343 169 aa5.13□□□□□ -1.59
AC078880.2-201ENST00000547948 NR2E1Q9Y466 385 aa5.13□□□□□ -1.59
AC078880.2-201ENST00000547948 IRAK3Q9Y616 596 aa5.13□□□□□ -1.59
AC078880.2-201ENST00000547948 PATJQ8NI35 1801 aa5.13□□□□□ -1.59
AC078880.2-201ENST00000547948 SCN1AP35498 2009 aa5.13□□□□□ -1.59
AC078880.2-201ENST00000547948 TCAF2A6NFQ2 919 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 C5orf60A6NFR6 353 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 ARHGAP42A6NI28 874 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 KCNU1A8MYU2 1149 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 E9PAM4 449 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 C5orf67F2Z3F1 127 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 MAP2K7O14733 419 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 DCLK1O15075 740 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 CHADO15335 359 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 TEX28O15482 410 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 MSI1O43347 362 aaKnown RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 RRP9O43818 475 aaKnown RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 PPFIA2O75334 1257 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 LRIG2O94898 1065 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 HNRNPA1P09651 372 aaKnown RBP eCLIP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 ZDHHC11BP0C7U3 371 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 SRGAP2BP0DMP2 458 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 MYBL2P10244 700 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 TSHRP16473 764 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 ERCC2P18074 760 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 RPL17P18621 184 aaKnown RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 NME2P22392 152 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 DDX6P26196 483 aaKnown RBP eCLIP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 HOXA9P31269 272 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 BMPR1AP36894 532 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 GIPRP48546 466 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 MAPKAPK2P49137 400 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 NDST2P52849 883 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 ITGA8P53708 1063 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 FAM193AP78312 1265 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 MRPS25P82663 173 aaKnown RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 CDK16Q00536 496 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 GBE1Q04446 702 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 AP1B1Q10567 949 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 SEMA3BQ13214 749 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 PRPSAP1Q14558 356 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 PRKD1Q15139 912 aaPredicted RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 RAB30Q15771 203 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 PARP15Q460N3 678 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 ARHGAP15Q53QZ3 475 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 PPM1LQ5SGD2 360 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 SDHAF4Q5VUM1 108 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 PLPP4Q5VZY2 271 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 HIBCHQ6NVY1 386 aaPredicted RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 RSPO2Q6UXX9 243 aaPredicted RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 TAS1R1Q7RTX1 841 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 SCD5Q86SK9 330 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 CCDC13Q8IYE1 715 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 PDIK1LQ8N165 341 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 BBS5Q8N3I7 341 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 RIBC1Q8N443 379 aaPredicted RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 TTC9BQ8N6N2 239 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 PQLC3Q8N755 202 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 RTL3Q8N8U3 475 aaKnown RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 ZNF557Q8N988 423 aaPredicted RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 FAM71DQ8N9W8 422 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 GRIN3AQ8TCU5 1115 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 HTR3CQ8WXA8 447 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 CASP10Q92851 521 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 LRRC39Q96DD0 335 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 VWCEQ96DN2 955 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 FCRL2Q96LA5 508 aaPredicted RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 SPATA13Q96N96 652 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 OLFM3Q96PB7 478 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 TGS1Q96RS0 853 aaKnown RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 FAM118BQ9BPY3 351 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 HERPUD2Q9BSE4 406 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 VN1R3Q9BXE9 311 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 ZYG11BQ9C0D3 744 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 LMAN2LQ9H0V9 348 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 MIR1-1HGQ9H1L0 117 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 PABPC3Q9H361 631 aaKnown RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 PLEKHA4Q9H4M7 779 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 NMUR1Q9HB89 426 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 XAB2Q9HCS7 855 aaKnown RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 EIF2B3Q9NR50 452 aaKnown RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 ZDHHC18Q9NUE0 388 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 MTMR10Q9NXD2 777 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 GRHL1Q9NZI5 618 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 DTLQ9NZJ0 730 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 KLHL8Q9P2G9 620 aaPredicted RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 PPARGC1AQ9UBK2 798 aaKnown RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 SFMBT1Q9UHJ3 866 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 TRHDEQ9UKU6 1024 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 ZMYND8Q9ULU4 1186 aaPredicted RBP5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 HPCAL4Q9UM19 191 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 ZNF510Q9Y2H8 683 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 ATP8A1Q9Y2Q0 1164 aa5.12□□□□□ -1.59
AC078880.2-201ENST00000547948 A0A087WUV0 522 aaPredicted RBP5.11□□□□□ -1.59
AC078880.2-201ENST00000547948 TRAV19A0A0A6YYK7 116 aa5.11□□□□□ -1.59
AC078880.2-201ENST00000547948 LINC01553A4QN01 128 aa5.11□□□□□ -1.59
AC078880.2-201ENST00000547948 ZNF840PA6NDX5 716 aa5.11□□□□□ -1.59
AC078880.2-201ENST00000547948 ERI2A8K979 691 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms