RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 SHANK1Q9Y566 2161 aa6.92□□□□□ -1.3
CCDC60-205ENST00000546345 OTOGQ6ZRI0 2925 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 CELSR2Q9HCU4 2923 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 MED13LQ71F56 2210 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 BLACEA4D250 179 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 PMS2P1A4D2B8 440 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 EIF3CLB5ME19 914 aaKnown RBP6.91□□□□□ -1.3
CCDC60-205ENST00000546345 C10orf142B7Z368 130 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 CLDN3O15551 220 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 PRODHO43272 600 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 COCHO43405 550 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 XPOTO43592 962 aaKnown RBP6.91□□□□□ -1.3
CCDC60-205ENST00000546345 IGHV4-34P06331 123 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 MSL3P1P0C860 447 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 CDK4P11802 303 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 PRKCHP24723 683 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 MAGEA11P43364 429 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 PDE6CP51160 858 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 CACNA2D1P54289 1103 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 RIPPLY3P57055 190 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 ERVFRD-1P60508 538 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 GABREP78334 506 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 TSPY1Q01534 308 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 MAP4K2Q12851 820 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 TMEM132DQ14C87 1099 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 ME3Q16798 604 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 LONRF2Q1L5Z9 754 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 TRIM65Q6PJ69 517 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 MICALCLQ6ZW33 695 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 B4GALNT4Q76KP1 1039 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 KCNK18Q7Z418 384 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 FAM124AQ86V42 546 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 METTL23Q86XA0 190 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 SCN4BQ8IWT1 228 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 EID2Q8N6I1 236 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 CXorf38Q8TB03 319 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 DIO2Q92813 273 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 MYLPFQ96A32 169 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 OTUB2Q96DC9 234 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 ELF4Q99607 663 aaPredicted RBP6.91□□□□□ -1.3
CCDC60-205ENST00000546345 EIF3CQ99613 913 aaKnown RBP6.91□□□□□ -1.3
CCDC60-205ENST00000546345 DNAJC7Q99615 494 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 EPB41L4BQ9H329 900 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 DDX43Q9NXZ2 648 aaKnown RBP6.91□□□□□ -1.3
CCDC60-205ENST00000546345 CPSF3Q9UKF6 684 aaKnown RBP6.91□□□□□ -1.3
CCDC60-205ENST00000546345 NME7Q9Y5B8 376 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 CELSR1Q9NYQ6 3014 aa6.91□□□□□ -1.3
CCDC60-205ENST00000546345 LRP4O75096 1905 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 FAM237AA0A1B0GTK4 181 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 TARSL2A2RTX5 802 aaKnown RBP6.9□□□□□ -1.3
CCDC60-205ENST00000546345 KPNA7A9QM74 516 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 NEDD8-MDP1E9PL57 170 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 LAD1O00515 517 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 OGTO15294 1046 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 DLX3O60479 287 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 TSPAN3O60637 253 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 SHOX2O60902 331 aaPredicted RBP6.9□□□□□ -1.3
CCDC60-205ENST00000546345 ATP2C2O75185 946 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 URI1O94763 535 aaPredicted RBP6.9□□□□□ -1.3
CCDC60-205ENST00000546345 CISD3P0C7P0 127 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 MBL2P11226 248 aaPredicted RBP6.9□□□□□ -1.3
CCDC60-205ENST00000546345 PABPC1P11940 636 aaKnown RBP6.9□□□□□ -1.3
CCDC60-205ENST00000546345 PAX3P23760 479 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 CDC25AP30304 524 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 ARHGAP25P42331 645 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 LMAN1P49257 510 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 ERVPABLB-1P60509 514 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 PSMC1P62191 440 aaKnown RBP6.9□□□□□ -1.3
CCDC60-205ENST00000546345 SRSF6Q13247 344 aaKnown RBP6.9□□□□□ -1.3
CCDC60-205ENST00000546345 ILKQ13418 452 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 SLMAPQ14BN4 828 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 ANO4Q32M45 955 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 SLC35F1Q5T1Q4 408 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 ACBD5Q5T8D3 534 aaPredicted RBP6.9□□□□□ -1.3
CCDC60-205ENST00000546345 FAM171BQ6P995 826 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 C1orf186Q6ZWK4 172 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 TMPRSS6Q8IU80 811 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 PPIL6Q8IXY8 311 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 LZTR1Q8N653 840 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 C3orf20Q8ND61 904 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 MAGEC3Q8TD91 643 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 KCNN1Q92952 543 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 FUBP3Q96I24 572 aaKnown RBP eCLIP6.9□□□□□ -1.3
CCDC60-205ENST00000546345 SPATA17Q96L03 361 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 PANX2Q96RD6 677 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 ACBD6Q9BR61 282 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 NTPCRQ9BSD7 190 aaKnown RBP6.9□□□□□ -1.3
CCDC60-205ENST00000546345 DPH1Q9BZG8 443 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 ZNF552Q9H707 407 aaPredicted RBP6.9□□□□□ -1.3
CCDC60-205ENST00000546345 RPF1Q9H9Y2 349 aaKnown RBP6.9□□□□□ -1.3
CCDC60-205ENST00000546345 EBF2Q9HAK2 575 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 TRPM5Q9NZQ8 1165 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 TBC1D14Q9P2M4 693 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 GULP1Q9UBP9 304 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 TMEFF2Q9UIK5 374 aaPredicted RBP6.9□□□□□ -1.3
CCDC60-205ENST00000546345 CDC23Q9UJX2 597 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 DERAQ9Y315 318 aa6.9□□□□□ -1.3
CCDC60-205ENST00000546345 SETD2Q9BYW2 2564 aaPredicted RBP6.9□□□□□ -1.31
CCDC60-205ENST00000546345 ADGRG4Q8IZF6 3080 aa6.9□□□□□ -1.31
CCDC60-205ENST00000546345 DNHD1Q96M86 4753 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms