RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 SOHLH2Q9NX45 425 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 LEF1Q9UJU2 399 aaPredicted RBP15.57■□□□□ 0.08
CHD4-210ENST00000544040 C3orf18Q9UK00 162 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 ARHGEF5Q12774 1597 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 APOC4-APOC2K7ER74 178 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 APOC2P02655 101 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 VIL1P09327 827 aaKnown RBP15.57■□□□□ 0.08
CHD4-210ENST00000544040 INSRRP14616 1297 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 TGFBR2P37173 567 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 PIK3CGP48736 1102 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 FSTL1Q12841 308 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 KCNA10Q16322 511 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 STXBP5Q5T5C0 1151 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 ZDHHC17Q8IUH5 632 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 STAG3L4Q8TBR4 150 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 KBTBD7Q8WVZ9 684 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 PTCD3Q96EY7 689 aaKnown RBP15.57■□□□□ 0.08
CHD4-210ENST00000544040 AP4B1Q9Y6B7 739 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 ZNF879B4DU55 563 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 GMFGO60234 142 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 ANXA5P08758 320 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 UQCRBP14927 111 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 EPHA3P29320 983 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 CYP4F8P98187 520 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 LDLRAP1Q5SW96 308 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 NOL9Q5SY16 702 aaKnown RBP15.57■□□□□ 0.08
CHD4-210ENST00000544040 WDR59Q6PJI9 974 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 PTCHD4Q6ZW05 846 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 PAGE2Q7Z2X7 111 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 SLCO6A1Q86UG4 719 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 PSTKQ8IV42 348 aaKnown RBP15.57■□□□□ 0.08
CHD4-210ENST00000544040 NEK7Q8TDX7 302 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 POLR1EQ9GZS1 481 aaKnown RBP15.57■□□□□ 0.08
CHD4-210ENST00000544040 U3KQV3 271 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 MAP3K4Q9Y6R4 1608 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 ATP6AP2A0A1C7CYW4 349 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 ATP6AP2O75787 350 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 RLN1P04808 185 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 HNRNPLP14866 589 aaKnown RBP eCLIP15.57■□□□□ 0.08
CHD4-210ENST00000544040 HSF2Q03933 536 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 NFIAQ12857 509 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 MOXD1Q6UVY6 613 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 PACS1Q6VY07 963 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 BAP1Q92560 729 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 EMID1Q96A84 441 aaPredicted RBP15.57■□□□□ 0.08
CHD4-210ENST00000544040 PRMT6Q96LA8 375 aaPredicted RBP15.57■□□□□ 0.08
CHD4-210ENST00000544040 ZNF354BQ96LW1 612 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 RGSL1A5PLK6 1076 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 HOXA2O43364 376 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 CCNYL3P0C7X3 344 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 BUD31P41223 144 aaPredicted RBP15.56■□□□□ 0.08
CHD4-210ENST00000544040 PGM5Q15124 567 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 LPCAT4Q643R3 524 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 ZNF655Q8N720 491 aaPredicted RBP15.56■□□□□ 0.08
CHD4-210ENST00000544040 NPAS2Q99743 824 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 FNDC11Q9BVV2 318 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 ACP6Q9NPH0 428 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 CCDC189A1A4V9 331 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 WWP2O00308 870 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 HGFP14210 728 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 RPL5P46777 297 aaKnown RBP15.56■□□□□ 0.08
CHD4-210ENST00000544040 DLG4P78352 724 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 ST3GAL1Q11201 340 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 CAMK1Q14012 370 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 ZNHIT3Q15649 155 aaPredicted RBP15.56■□□□□ 0.08
CHD4-210ENST00000544040 SLC15A2Q16348 729 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 PCID2Q5JVF3 399 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 SFRP1Q8N474 314 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 PIH1D2Q8WWB5 315 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 S100ZQ8WXG8 99 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 VPS4AQ9UN37 437 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 NADKO95544 446 aaPredicted RBP15.56■□□□□ 0.08
CHD4-210ENST00000544040 MTTPP55157 894 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 EARS2Q5JPH6 523 aaKnown RBP15.56■□□□□ 0.08
CHD4-210ENST00000544040 CNSTQ6PJW8 725 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 USP45Q70EL2 814 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 LEMD2Q8NC56 503 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 FAM98AQ8NCA5 519 aaKnown RBP15.56■□□□□ 0.08
CHD4-210ENST00000544040 MLPHQ9BV36 600 aaPredicted RBP15.56■□□□□ 0.08
CHD4-210ENST00000544040 ASB8Q9H765 288 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 EXO5Q9H790 373 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 TNPO3Q9Y5L0 923 aaKnown RBP15.56■□□□□ 0.08
CHD4-210ENST00000544040 COMMD3-BMI1R4GMX3 469 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 DCDC2CA8MYV0 355 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 SNAP91O60641 907 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 TTKP33981 857 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 AUHQ13825 339 aaKnown RBP15.56■□□□□ 0.08
CHD4-210ENST00000544040 NFE2Q16621 373 aaPredicted RBP15.56■□□□□ 0.08
CHD4-210ENST00000544040 C12orf56Q8IXR9 622 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 TEX47Q8TBZ9 253 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 POPDC2Q9HBU9 364 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 PNPLA3Q9NST1 481 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 MORF4L1Q9UBU8 362 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 ZNHIT2Q9UHR6 403 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 OR10H1Q9Y4A9 318 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 ABHD14A-ACY1A0A1B0GW23 586 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 ARF4P18085 180 aaPredicted RBP15.56■□□□□ 0.08
CHD4-210ENST00000544040 RPS6KA3P51812 740 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 CBX3Q13185 183 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 TP53INP1Q96A56 240 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms