RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 F5H423 210 aaPredicted RBP6.39□□□□□ -1.39
LTBR-212ENST00000543542 RNF103O00237 685 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 PLK4O00444 970 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 INSIG1O15503 277 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 ZNF821O75541 412 aaPredicted RBP6.39□□□□□ -1.39
LTBR-212ENST00000543542 RHOBTB1O94844 696 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 PCDH8O95206 1070 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 HLA-DQB2P05538 268 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 CTSLP07711 333 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 SERPINF2P08697 491 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TBC1D3HP0C7X1 549 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 CES1P23141 567 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 NFKBIAP25963 317 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 CD6P30203 668 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 HOXA6P31267 233 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 CNR2P34972 360 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 CD86P42081 329 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 PAFAH1B1P43034 410 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 RGRP47804 291 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 CSNK1DP48730 415 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 DHPSP49366 369 aaPredicted RBP6.39□□□□□ -1.39
LTBR-212ENST00000543542 NEK3P51956 506 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 EPHB1P54762 984 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 AP1S1P61966 158 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 IFI35P80217 286 aaPredicted RBP6.39□□□□□ -1.39
LTBR-212ENST00000543542 DSC2Q02487 901 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 NSUN2Q08J23 767 aaKnown RBP eCLIP6.39□□□□□ -1.39
LTBR-212ENST00000543542 CNTN1Q12860 1018 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 ZBTB17Q13105 803 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 SRSF5Q13243 272 aaKnown RBP6.39□□□□□ -1.39
LTBR-212ENST00000543542 PRPSAP1Q14558 356 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 PRKD1Q15139 912 aaPredicted RBP6.39□□□□□ -1.39
LTBR-212ENST00000543542 ELF2Q15723 593 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 PCSK7Q16549 785 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 LPAL2Q16609 132 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TEX44Q53QW1 395 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 ZNF805Q5CZA5 627 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TBC1D3GQ6DHY5 549 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 ITPRIPL1Q6GPH6 555 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TBC1D3CQ6IPX1 549 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 CCDC70Q6NSX1 233 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 SYT10Q6XYQ8 523 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 ARHGEF18Q6ZSZ5 1173 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 USP30Q70CQ3 517 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 ERN2Q76MJ5 926 aaKnown RBP6.39□□□□□ -1.39
LTBR-212ENST00000543542 ARMCX6Q7L4S7 300 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 LPCAT2Q7L5N7 544 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TTC7BQ86TV6 843 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 C11orf74Q86VG3 221 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 PLPP6Q8IY26 295 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 RGL4Q8IZJ4 473 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TBC1D3Q8IZP1 549 aaPredicted RBP6.39□□□□□ -1.39
LTBR-212ENST00000543542 NDUFAF2Q8N183 169 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 PGBD5Q8N414 524 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 FAM160A2Q8N612 972 aaPredicted RBP6.39□□□□□ -1.39
LTBR-212ENST00000543542 DEFB119Q8N690 84 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TEX26Q8N6G2 289 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 GAB3Q8WWW8 586 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 ATG4AQ8WYN0 398 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 MAML1Q92585 1016 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 LRRC45Q96CN5 670 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 IFT43Q96FT9 208 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TOE1Q96GM8 510 aaKnown RBP6.39□□□□□ -1.39
LTBR-212ENST00000543542 LRIG1Q96JA1 1093 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 MS4A14Q96JA4 679 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 OLFM3Q96PB7 478 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 NUDCD1Q96RS6 583 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TUBGCP5Q96RT8 1024 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 WDR24Q96S15 920 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 MGME1Q9BQP7 344 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 GPR174Q9BXC1 333 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 FRMD8P1Q9BZ68 369 aaPredicted RBP6.39□□□□□ -1.39
LTBR-212ENST00000543542 NEUROG2Q9H2A3 272 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 SUV39H2Q9H5I1 410 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 NOD2Q9HC29 1040 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 HOMER3Q9NSC5 361 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 FAM86C1Q9NVL1 165 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 AMACRQ9UHK6 382 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 RSPH14Q9UHP6 348 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 SARDHQ9UL12 918 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 PPM1HQ9ULR3 514 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 R3HDM2Q9Y2K5 976 aaKnown RBP6.39□□□□□ -1.39
LTBR-212ENST00000543542 SAR1BQ9Y6B6 198 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 WASF2Q9Y6W5 498 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 F5P12259 2224 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 EML5Q05BV3 1969 aa6.38□□□□□ -1.39
LTBR-212ENST00000543542 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.38□□□□□ -1.39
LTBR-212ENST00000543542 IGHV1OR15-9A0A0B4J2B8 117 aa6.38□□□□□ -1.39
LTBR-212ENST00000543542 A0A1W2PQ67 120 aa6.38□□□□□ -1.39
LTBR-212ENST00000543542 BCLAF3A2AJT9 711 aaKnown RBP6.38□□□□□ -1.39
LTBR-212ENST00000543542 CFAP69A5D8W1 941 aa6.38□□□□□ -1.39
LTBR-212ENST00000543542 GOLGA6CA6NDK9 693 aa6.38□□□□□ -1.39
LTBR-212ENST00000543542 GOLGA6BA6NDN3 693 aa6.38□□□□□ -1.39
LTBR-212ENST00000543542 C16orf96A6NNT2 1141 aa6.38□□□□□ -1.39
LTBR-212ENST00000543542 CES2O00748 559 aa6.38□□□□□ -1.39
LTBR-212ENST00000543542 MUSKO15146 869 aa6.38□□□□□ -1.39
LTBR-212ENST00000543542 ZNF185O15231 689 aa6.38□□□□□ -1.39
LTBR-212ENST00000543542 LIASO43766 372 aa6.38□□□□□ -1.39
LTBR-212ENST00000543542 GJB3O75712 270 aa6.38□□□□□ -1.39
LTBR-212ENST00000543542 FSBPO95073 299 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms