RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 KIAA1958Q8N8K9 716 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 GALNT6Q8NCL4 622 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 OR6K2Q8NGY2 324 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 OMA1Q96E52 524 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 QRFPRQ96P65 431 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 PPP1R10Q96QC0 940 aaKnown RBP6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 YIPF4Q9BSR8 244 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 B3GNT5Q9BYG0 378 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 DPY30Q9C005 99 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 ARHGEF4Q9NR80 690 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 EIF2B4Q9UI10 523 aaKnown RBP6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 ZNF112Q9UJU3 913 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 SNX8Q9Y5X2 465 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 FSBPO95073 299 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 EIF2S1P05198 315 aaKnown RBP6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 ADRA1BP35368 520 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 SKIV2L2P42285 1042 aaKnown RBP6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 SLC16A1P53985 500 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 ACSM2AQ08AH3 577 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 ACSM2BQ68CK6 577 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 CHST9Q7L1S5 443 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 UBE2E3Q969T4 207 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 GMLQ99445 158 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 COPS8Q99627 209 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 ADNPQ9H2P0 1102 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 BPIFA1Q9NP55 256 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 CHST7Q9NS84 486 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 ETAA1Q9NY74 926 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 CPQQ9Y646 472 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 TLL2Q9Y6L7 1015 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 MEN1O00255 615 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 WNT7AO00755 349 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 MT-CO1P00395 513 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 PRNPP04156 253 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC10A3P09131 477 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 CTPS1P17812 591 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 NME5P56597 212 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 ARPC4P59998 168 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 ELP6Q0PNE2 266 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 GRSF1Q12849 480 aaKnown RBP eCLIP6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 NAB1Q13506 487 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 CCDC153Q494R4 210 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 TRIM60Q495X7 471 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 N4BP2L1Q5TBK1 243 aaPredicted RBP6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 NPNTQ6UXI9 565 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 BEND7Q8N7W2 519 aaPredicted RBP6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 C4orf32Q8N8J7 132 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 ARL14EPQ8N8R7 260 aaPredicted RBP6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 IRGQQ8WZA9 623 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 HERVK_113Q902F9 699 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 FEM1CQ96JP0 617 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 TLR10Q9BXR5 811 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 EFCAB1Q9HAE3 211 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 MORF4L1Q9UBU8 362 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 PSME2Q9UL46 239 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 CARD8Q9Y2G2 431 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 STXBP5LQ9Y2K9 1186 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 TNPO3Q9Y5L0 923 aaKnown RBP6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 UBXN8O00124 270 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 CES2O00748 559 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 TSPAN6O43657 245 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 FGF1P05230 155 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 UGT2B4P06133 528 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 PIRTP0C851 137 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 TKTP29401 623 aaKnown RBP6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 LBX1P52954 281 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 NFYCQ13952 458 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 MIIPQ5JXC2 388 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 NKAPQ8N5F7 415 aaKnown RBP6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 ZNF384Q8TF68 577 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 PCED1BQ96HM7 432 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 FAM124BQ9H5Z6 455 aaPredicted RBP6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 C10orf88Q9H8K7 445 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 MID1IP1Q9NPA3 183 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 XPNPEP1Q9NQW7 623 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 ZMYM5Q9UJ78 669 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 L1RE1Q9UN81 338 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 ENTPD4Q9Y227 616 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 NALCNQ8IZF0 1738 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 PER2O15055 1255 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 TRIM13O60858 407 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 THRAP10827 490 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 TLX1P31314 330 aaPredicted RBP6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 GAD2Q05329 585 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 KCNMA1Q12791 1236 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 CNGA3Q16281 694 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 TPGS2Q68CL5 300 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 GDF6Q6KF10 455 aaPredicted RBP6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 C11orf74Q86VG3 221 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 ANKRD13BQ86YJ7 626 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 P3H2Q8IVL5 708 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 AGGF1Q8N302 714 aaeCLIP6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 OR14C36Q8NHC7 312 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 USP7Q93009 1102 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 TUBA1CQ9BQE3 449 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 RHBGQ9H310 441 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 POLMQ9NP87 494 aaPredicted RBP6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 ERVW-1Q9UQF0 538 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 ASB3Q9Y575 518 aa6.96□□□□□ -1.3
SRGAP1-206ENST00000543397 PCDHGA1Q9Y5H4 931 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms