RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 TRPC7Q9HCX4 862 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 HMX1Q9NP08 348 aaPredicted RBP14.38□□□□□ -0.11
PRAME-214ENST00000543184 ARHGEF38Q9NXL2 777 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 FZD10Q9ULW2 581 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 PRPF19Q9UMS4 504 aaKnown RBP14.38□□□□□ -0.11
PRAME-214ENST00000543184 MTF2Q9Y483 593 aaPredicted RBP14.38□□□□□ -0.11
PRAME-214ENST00000543184 SAC3D1A6NKF1 404 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 BOLA2-SMG1P6H3BVE0 249 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 PDLIM1O00151 329 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 BCAS2O75934 225 aaPredicted RBP14.38□□□□□ -0.11
PRAME-214ENST00000543184 MLNP12872 115 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 AKAP5P24588 427 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 PTPN3P26045 913 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 PRDX6P30041 224 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 CD68P34810 354 aaPredicted RBP14.38□□□□□ -0.11
PRAME-214ENST00000543184 CTBSQ01459 385 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 ZBTB17Q13105 803 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 OTOP3Q7RTS5 596 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 CLEC14AQ86T13 490 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 MFSD6LQ8IWD5 586 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 NPWQ8N729 165 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 LPGAT1Q92604 370 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 LRCH3Q96II8 777 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 MLPHQ9BV36 600 aaPredicted RBP14.38□□□□□ -0.11
PRAME-214ENST00000543184 ATXN3LQ9H3M9 355 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 LRRC40Q9H9A6 602 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 EFCAB1Q9HAE3 211 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 ZBTB26Q9HCK0 441 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.38□□□□□ -0.11
PRAME-214ENST00000543184 ERAP1Q9NZ08 941 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 TLK1Q9UKI8 766 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.38□□□□□ -0.11
PRAME-214ENST00000543184 LRRC37A2A6NM11 1700 aa14.38□□□□□ -0.11
PRAME-214ENST00000543184 RBM47A0AV96 593 aaKnown RBP14.37□□□□□ -0.11
PRAME-214ENST00000543184 PRORSD1PA6NEY8 169 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 ZNF839A8K0R7 811 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 ZFXP17010 805 aaPredicted RBP14.37□□□□□ -0.11
PRAME-214ENST00000543184 NFKB1P19838 968 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 ATICP31939 592 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 PSMD7P51665 324 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 CBLBQ13191 982 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 SPANXN3Q5MJ09 141 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 CNSTQ6PJW8 725 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 CYS1Q717R9 158 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 SPATA22Q8NHS9 363 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 HMGCLL1Q8TB92 370 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 SLCO4A1Q96BD0 722 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 ZFRQ96KR1 1074 aaKnown RBP14.37□□□□□ -0.11
PRAME-214ENST00000543184 DRC3Q9H069 523 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 FAM96AQ9H5X1 160 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 BFARQ9NZS9 450 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 AP4S1Q9Y587 144 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 AURKAO14965 403 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 NR1H2P55055 460 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 PSME3P61289 254 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 POU5F1BQ06416 359 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 OTUD1Q5VV17 481 aaPredicted RBP14.37□□□□□ -0.11
PRAME-214ENST00000543184 HMBOX1Q6NT76 420 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 HERC6Q8IVU3 1022 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 SMARCAD1Q9H4L7 1026 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 PRDM16Q9HAZ2 1276 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 PIGVQ9NUD9 493 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 GIMAP2Q9UG22 337 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 PCDHGA7Q9Y5G6 932 aa14.37□□□□□ -0.11
PRAME-214ENST00000543184 EEF2KO00418 725 aaKnown RBP14.36□□□□□ -0.11
PRAME-214ENST00000543184 DUSP11O75319 330 aaKnown RBP14.36□□□□□ -0.11
PRAME-214ENST00000543184 ATP6V1G1O75348 118 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 IGHA2P01877 340 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 AHSGP02765 367 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 DESP17661 470 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 ERCC2P18074 760 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 MAGEA12P43365 314 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 NSUN2Q08J23 767 aaKnown RBP eCLIP14.36□□□□□ -0.11
PRAME-214ENST00000543184 IKBKEQ14164 716 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 POU6F1Q14863 301 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 DBN1Q16643 649 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 TSTD2Q5T7W7 516 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 LIPMQ5VYY2 423 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 KRT80Q6KB66 452 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 CHERPQ8IWX8 916 aaKnown RBP14.36□□□□□ -0.11
PRAME-214ENST00000543184 CENPLQ8N0S6 344 aaPredicted RBP14.36□□□□□ -0.11
PRAME-214ENST00000543184 FAM47BQ8NA70 645 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 CENPIQ92674 756 aaPredicted RBP14.36□□□□□ -0.11
PRAME-214ENST00000543184 FAM167AQ96KS9 214 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 C1QTNF1Q9BXJ1 281 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 EIF2AQ9BY44 585 aaKnown RBP14.36□□□□□ -0.11
PRAME-214ENST00000543184 SLC2A11Q9BYW1 496 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 FBRSL1Q9HCM7 1045 aaKnown RBP14.36□□□□□ -0.11
PRAME-214ENST00000543184 RSL24D1Q9UHA3 163 aaKnown RBP14.36□□□□□ -0.11
PRAME-214ENST00000543184 SOCS2O14508 198 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 SPTLC1O15269 473 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 TREHO43280 583 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 C22orf31O95567 290 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 SLC35E2BP0CK96 405 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 KCNA5P22460 613 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 PTPN9P43378 593 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 DCTN2Q13561 401 aaKnown RBP14.36□□□□□ -0.11
PRAME-214ENST00000543184 IRF5Q13568 498 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 C16orf72Q14CZ0 275 aa14.36□□□□□ -0.11
PRAME-214ENST00000543184 AGKQ53H12 422 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms