RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 RAD23AP54725 363 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 WNT3AP56704 352 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 ZNF252P-AS1Q0IIN9 211 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 FSTL1Q12841 308 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 POLD3Q15054 466 aaPredicted RBP8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 AARS2Q5JTZ9 985 aaKnown RBP8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 C6orf52Q5T4I8 152 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 CACHD1Q5VU97 1274 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 ARHGAP17Q68EM7 881 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 SLC9A4Q6AI14 798 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 FRMD7Q6ZUT3 714 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 OTOP3Q7RTS5 596 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 P3H2Q8IVL5 708 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 TOP6BLQ8N6T0 577 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 PTGR2Q8N8N7 351 aaPredicted RBP8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 FAM81AQ8TBF8 368 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 STAG3L4Q8TBR4 150 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 CDCA5Q96FF9 252 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 CIB1Q99828 191 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 SH3GL1Q99961 368 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 SPATA16Q9BXB7 569 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 NOL11Q9H8H0 719 aaKnown RBP8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 GLOD4Q9HC38 313 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 IGSF9Q9P2J2 1179 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 ATXN10Q9UBB4 475 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 RSL24D1Q9UHA3 163 aaKnown RBP8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 CDH9Q9ULB4 789 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 SLC34A2O95436 690 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 PTPN3P26045 913 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 CD86P42081 329 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 CDK18Q07002 472 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 ZNF177Q13360 481 aaPredicted RBP8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 SOWAHAQ2M3V2 549 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 STXBP5Q5T5C0 1151 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 CGB2Q6NT52 195 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 OLFML1Q6UWY5 402 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 ZYG11AQ6WRX3 759 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 TIFABQ6ZNK6 161 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 GK5Q6ZS86 529 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 LRRC8DQ7L1W4 858 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 TLK2Q86UE8 772 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 LRRC49Q8IUZ0 686 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 MYO1HQ8N1T3 1032 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 PQLC3Q8N755 202 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 FAM47BQ8NA70 645 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 PPTC7Q8NI37 304 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 TRPC4APQ8TEL6 797 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 LPGAT1Q92604 370 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 HDAC10Q969S8 669 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 FBXO44Q9H4M3 255 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 CLK4Q9HAZ1 481 aaKnown RBP8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 WWOXQ9NZC7 414 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 FAM8A1Q9UBU6 413 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 EGFL7Q9UHF1 273 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 DMTF1Q9Y222 760 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 MYH14Q7Z406 1995 aaKnown RBP8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 DHRS12A0PJE2 317 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 KCNU1A8MYU2 1149 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 TSPAN3O60637 253 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 VPS4BO75351 444 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 IPO13O94829 963 aaKnown RBP8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 EGFRP00533 1210 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 APOA1P02647 267 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 CHRNGP07510 517 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 GNAZP19086 355 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 PSEN2P49810 448 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 TARBP2Q15633 366 aaKnown RBP8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 CNPY1Q3B7I2 92 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 SLC9B1Q4ZJI4 515 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 DCLRE1AQ6PJP8 1040 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 CCDC81Q6ZN84 652 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 CUZD1Q86UP6 607 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 FAM35AQ86V20 835 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 SATL1Q86VE3 508 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 ZDHHC13Q8IUH4 622 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 HERC6Q8IVU3 1022 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 TMEM174Q8WUU8 243 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 SLC35F5Q8WV83 523 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 LENG1Q96BZ8 264 aaPredicted RBP8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 FCRL2Q96LA5 508 aaPredicted RBP8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 SLC9A7Q96T83 725 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 TINF2Q9BSI4 451 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 GBA3Q9H227 469 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 SEMA4BQ9NPR2 832 aaPredicted RBP8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 PDLIM7Q9NR12 457 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 COMMD8Q9NX08 183 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 ANAPC2Q9UJX6 822 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 PTCH2Q9Y6C5 1203 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 ITGB4P16144 1822 aa8.28□□□□□ -1.08
PRKAB1-207ENST00000542698 HNRNPRO43390 633 aaKnown RBP8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 LRIG2O94898 1065 aa8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 C22orf31O95567 290 aa8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 DARSP14868 501 aaKnown RBP8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 NMBRP28336 390 aa8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 NDUFV1P49821 464 aa8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 ZNF280AP59817 542 aaPredicted RBP8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 TRAF2Q12933 501 aa8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 TRIM25Q14258 630 aaKnown RBP8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 VEPH1Q14D04 833 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms