RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 MLLT3P42568 568 aaPredicted RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 SLC1A2P43004 574 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 PAPOLAP51003 745 aaKnown RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 MPP1Q00013 466 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 POU4F1Q01851 419 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 DSC1Q08554 894 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 NSUN2Q08J23 767 aaKnown RBP eCLIP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 ITGA7Q13683 1181 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 HERC3Q15034 1050 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 NFE2Q16621 373 aaPredicted RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 GSTA3Q16772 222 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 PIK3R6Q5UE93 754 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 FRMD7Q6ZUT3 714 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 TMC7Q7Z402 723 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 SLC41A1Q8IVJ1 513 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 DENND6AQ8IWF6 608 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 ZNF683Q8IZ20 524 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 KIRREL3Q8IZU9 778 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 PHTF2Q8N3S3 785 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 CALML6Q8TD86 181 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 KCTD4Q8WVF5 259 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 MRPL46Q9H2W6 279 aaKnown RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 FBXO44Q9H4M3 255 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 ZNF385DQ9H6B1 395 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 S100A14Q9HCY8 104 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 PRDM5Q9NQX1 630 aaPredicted RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 VPS45Q9NRW7 570 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 NDFIP2Q9NV92 336 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 CPSF2Q9P2I0 782 aaKnown RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 IPO11Q9UI26 975 aaKnown RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 PRPF19Q9UMS4 504 aaKnown RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 RUVBL2Q9Y230 463 aaKnown RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 THSD7BQ9C0I4 1608 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 E9PBE3 544 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 KLHL41O60662 606 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 NEBLO76041 1014 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 PIGNO95427 931 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 EOMESO95936 686 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 CHRNGP07510 517 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 YY1P25490 414 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 MAGEA11P43364 429 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 PGFP49763 221 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 MTTPP55157 894 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 DNAJB13P59910 316 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 SREBF2Q12772 1141 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 ARL13AQ5H913 290 aaPredicted RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 SH2D4BQ5SQS7 431 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 ACBD5Q5T8D3 534 aaPredicted RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 GLB1LQ6UWU2 654 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 ACAD11Q709F0 780 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 PIWIL4Q7Z3Z4 852 aaKnown RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 MFSD6LQ8IWD5 586 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 NUP93Q8N1F7 819 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 IMP4Q96G21 291 aaKnown RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 OR52B2Q96RD2 323 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 MRPL57Q9BQC6 102 aaKnown RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 TRPV6Q9H1D0 765 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 NOL6Q9H6R4 1146 aaKnown RBP6.62□□□□□ -1.35
PTPRO-208ENST00000542557 RGS18Q9NS28 235 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 MRGBPQ9NV56 204 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 TMEM248Q9NWD8 314 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 FBXO5Q9UKT4 447 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 SSX2IPQ9Y2D8 614 aa6.62□□□□□ -1.35
PTPRO-208ENST00000542557 DOCK4Q8N1I0 1966 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 IGLV3-10A0A075B6K4 115 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 FAM92AA1XBS5 289 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 GRID2O43424 1007 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 DLX3O60479 287 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 THRAP10827 490 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 CPB1P15086 417 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 PIK3R1P27986 724 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 PPARGP37231 505 aaPredicted RBP6.61□□□□□ -1.35
PTPRO-208ENST00000542557 RENBPP51606 427 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 CLCN5P51795 746 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 WNT3AP56704 352 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 SATB1Q01826 763 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 DSG1Q02413 1049 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 CTBP1Q13363 440 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 CUL3Q13618 768 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 SLC14A2Q15849 920 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 CNGA3Q16281 694 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 KCNA10Q16322 511 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 SLC39A12Q504Y0 691 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 RALGPS1Q5JS13 557 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 ZNF470Q6ECI4 717 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 CAPRIN2Q6IMN6 1127 aaKnown RBP6.61□□□□□ -1.35
PTPRO-208ENST00000542557 C14orf80Q86SX3 495 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 SAPCD2Q86UD0 394 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 CEP97Q8IW35 865 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 KBTBD2Q8IY47 623 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 DEFB107AQ8IZN7 70 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 LSMEM2Q8N112 164 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 FBXW8Q8N3Y1 598 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 TEX26Q8N6G2 289 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 PCSK9Q8NBP7 692 aaKnown RBP6.61□□□□□ -1.35
PTPRO-208ENST00000542557 SNRNP27Q8WVK2 155 aaKnown RBP6.61□□□□□ -1.35
PTPRO-208ENST00000542557 CCDC126Q96EE4 140 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 MAELQ96JY0 434 aaKnown RBP6.61□□□□□ -1.35
PTPRO-208ENST00000542557 FTHL17Q9BXU8 183 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 ZYG11BQ9C0D3 744 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms