RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 LRRC4Q9HBW1 653 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 NDFIP2Q9NV92 336 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 CNOT6Q9ULM6 557 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 TARM1B6A8C7 271 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 ATP6V1B2P21281 511 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 GRIA3P42263 894 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 SLC7A2P52569 658 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 PRKAA1Q13131 559 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 DBN1Q16643 649 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 REP15Q6BDI9 236 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 KRT80Q6KB66 452 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 KLHL35Q6PF15 583 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 FAM35AQ86V20 835 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 SIX6OS1Q8N1H7 587 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 TTC16Q8NEE8 873 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 ADCY4Q8NFM4 1077 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 ISL2Q96A47 359 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 NPY6RQ99463 290 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 MUC3BQ9H195 1237 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 TMEM165Q9HC07 324 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 OLAHQ9NV23 265 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 ARHGEF38Q9NXL2 777 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 DSEQ9UL01 958 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 TMCO1Q9UM00 188 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 AKAP10O43572 662 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 DDHD2O94830 711 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 YBX3P16989 372 aaKnown RBP eCLIP10.47□□□□□ -0.732e-10■■□□□ 11.7
CDC42SE1-207ENST00000540998 GRM5P41594 1212 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 APLP1P51693 650 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 FASTKQ14296 549 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 PAN2Q504Q3 1202 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 METTL21CQ5VZV1 264 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 CLEC20AQ6ZU45 233 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 ARMCX2Q7L311 632 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 PIM3Q86V86 326 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 EMID1Q96A84 441 aaPredicted RBP10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 C3orf30Q96M34 536 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 OLFM1Q99784 485 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 NAT9Q9BTE0 207 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 FICDQ9BVA6 458 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 NAA50Q9GZZ1 169 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 FAM96AQ9H5X1 160 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 WDR6Q9NNW5 1121 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 CACNA2D2Q9NY47 1150 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 ACOT9Q9Y305 439 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 SMIM28A0A1B0GU29 152 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 H3BRB1 525 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 TIMM44O43615 452 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 LRIG2O94898 1065 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 SETSIPP0DME0 302 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 KCNC1P48547 511 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 PAFAH1B3Q15102 231 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 GRIK4Q16099 956 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 FAM187BQ17R55 369 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 C6orf10Q5SRN2 563 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 IFNEQ86WN2 208 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 CLVS1Q8IUQ0 354 aaPredicted RBP10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 ZNF786Q8N393 782 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 LINC01465Q8N7H1 131 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 ANKRD49Q8WVL7 239 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 WNT8BQ93098 351 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 DTNBP1Q96EV8 351 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 MCMBPQ9BTE3 642 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 GBA3Q9H227 469 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 TUT1Q9H6E5 874 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 ADAM28Q9UKQ2 775 aa10.47□□□□□ -0.73
CDC42SE1-207ENST00000540998 OR51F1A6NGY5 319 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 TRIM38O00635 465 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 UBFD1O14562 309 aaKnown RBP10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 SUPT3HO75486 399 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 PRPSAP1Q14558 356 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 TTLL4Q14679 1199 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 CHSY3Q70JA7 882 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 TRIM74Q86UV6 250 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 TRIM73Q86UV7 250 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 RETREG3Q86VR2 466 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 RYBPQ8N488 228 aaPredicted RBP10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 FIBCD1Q8N539 461 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 APPL2Q8NEU8 664 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 BEST2Q8NFU1 509 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 SPPL2BQ8TCT7 592 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 FBXL20Q96IG2 436 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 TSNARE1Q96NA8 513 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 C16orf70Q9BSU1 422 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 RHOJQ9H4E5 214 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 EPB41L1Q9H4G0 881 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 GTF2IRD1Q9UHL9 959 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 USP22Q9UPT9 525 aa10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 PIN4Q9Y237 131 aaKnown RBP10.46□□□□□ -0.73
CDC42SE1-207ENST00000540998 HTTP42858 3142 aa10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 TRIP12Q14669 1992 aaPredicted RBP10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 CABYRO75952 493 aa10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 STAMBPO95630 424 aa10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 NR1H2P55055 460 aa10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 TRIM25Q14258 630 aaKnown RBP10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZBTB6Q15916 424 aa10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 CYHR1Q6ZMK1 362 aa10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 ANKRD23Q86SG2 305 aa10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 SREK1Q8WXA9 508 aaKnown RBP10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZFRQ96KR1 1074 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms