RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 NEMP1O14524 444 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 SLC28A2O43868 658 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 GCATO75600 419 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 ANXA6P08133 673 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 CDH5P33151 784 aaPredicted RBP27.23■■□□□ 1.95
CHFR-218ENST00000540963 PDX1P52945 283 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 RNASE9P60153 205 aaKnown RBP27.23■■□□□ 1.95
CHFR-218ENST00000540963 PRRT3Q5FWE3 981 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 ESRP1Q6NXG1 681 aaKnown RBP27.23■■□□□ 1.95
CHFR-218ENST00000540963 TMEM35BQ8NCS4 154 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 CCDC3Q9BQI4 270 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.23■■□□□ 1.95
CHFR-218ENST00000540963 OSBPL1AQ9BXW6 950 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 SLC13A1Q9BZW2 595 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 ZDHHC6Q9H6R6 413 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 ACSL6Q9UKU0 697 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 PADI4Q9UM07 663 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 FCF1Q9Y324 198 aaKnown RBP27.23■■□□□ 1.95
CHFR-218ENST00000540963 SPTA1P02549 2419 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 SRGAP2O75044 1071 aa27.22■■□□□ 1.95
CHFR-218ENST00000540963 CD160O95971 181 aa27.22■■□□□ 1.95
CHFR-218ENST00000540963 PON1P27169 355 aa27.22■■□□□ 1.95
CHFR-218ENST00000540963 ABL2P42684 1182 aa27.22■■□□□ 1.95
CHFR-218ENST00000540963 ADKP55263 362 aaKnown RBP27.22■■□□□ 1.95
CHFR-218ENST00000540963 BPIFB4P59827 614 aa27.22■■□□□ 1.95
CHFR-218ENST00000540963 CRTC1Q6UUV9 634 aa27.22■■□□□ 1.95
CHFR-218ENST00000540963 BNIPLQ7Z465 357 aa27.22■■□□□ 1.95
CHFR-218ENST00000540963 RBFAQ8N0V3 343 aa27.22■■□□□ 1.95
CHFR-218ENST00000540963 LRRC61Q9BV99 259 aa27.22■■□□□ 1.95
CHFR-218ENST00000540963 C1QTNF7Q9BXJ2 289 aa27.22■■□□□ 1.95
CHFR-218ENST00000540963 CLCN1P35523 988 aa27.21■■□□□ 1.95
CHFR-218ENST00000540963 FOXR1Q6PIV2 292 aa27.21■■□□□ 1.95
CHFR-218ENST00000540963 LVRNQ6Q4G3 990 aa27.21■■□□□ 1.95
CHFR-218ENST00000540963 MACC1Q6ZN28 852 aa27.21■■□□□ 1.95
CHFR-218ENST00000540963 ARCQ7LC44 396 aa27.21■■□□□ 1.95
CHFR-218ENST00000540963 SLC47A2Q86VL8 602 aa27.21■■□□□ 1.95
CHFR-218ENST00000540963 SDR16C5Q8N3Y7 309 aa27.21■■□□□ 1.95
CHFR-218ENST00000540963 C18orf8Q96DM3 657 aa27.21■■□□□ 1.95
CHFR-218ENST00000540963 TMPRSS4Q9NRS4 437 aa27.21■■□□□ 1.95
CHFR-218ENST00000540963 AREL1O15033 823 aa27.2■■□□□ 1.94
CHFR-218ENST00000540963 YY2O15391 372 aa27.2■■□□□ 1.94
CHFR-218ENST00000540963 POP4O95707 220 aaKnown RBP27.2■■□□□ 1.94
CHFR-218ENST00000540963 GSRP00390 522 aa27.2■■□□□ 1.94
CHFR-218ENST00000540963 BLKP51451 505 aa27.2■■□□□ 1.94
CHFR-218ENST00000540963 DRAP1Q14919 205 aaPredicted RBP27.2■■□□□ 1.94
CHFR-218ENST00000540963 POLD3Q15054 466 aaPredicted RBP27.2■■□□□ 1.94
CHFR-218ENST00000540963 ZSCAN23Q3MJ62 389 aa27.2■■□□□ 1.94
CHFR-218ENST00000540963 FSTL5Q8N475 847 aaPredicted RBP27.2■■□□□ 1.94
CHFR-218ENST00000540963 OR2AP1Q8NGE2 309 aa27.2■■□□□ 1.94
CHFR-218ENST00000540963 TM6SF2Q9BZW4 377 aa27.2■■□□□ 1.94
CHFR-218ENST00000540963 TCEAL2Q9H3H9 227 aaPredicted RBP27.2■■□□□ 1.94
CHFR-218ENST00000540963 PMS2P1A4D2B8 440 aa27.19■■□□□ 1.94
CHFR-218ENST00000540963 FOXN3O00409 490 aaPredicted RBP27.19■■□□□ 1.94
CHFR-218ENST00000540963 PLD2O14939 933 aa27.19■■□□□ 1.94
CHFR-218ENST00000540963 ARHGAP6O43182 974 aa27.19■■□□□ 1.94
CHFR-218ENST00000540963 IGFALSP35858 605 aa27.19■■□□□ 1.94
CHFR-218ENST00000540963 CSRP3P50461 194 aa27.19■■□□□ 1.94
CHFR-218ENST00000540963 SNRPD1P62314 119 aaKnown RBP27.19■■□□□ 1.94
CHFR-218ENST00000540963 NRG1Q02297 640 aaPredicted RBP27.19■■□□□ 1.94
CHFR-218ENST00000540963 APBA1Q02410 837 aa27.19■■□□□ 1.94
CHFR-218ENST00000540963 FAM102AQ5T9C2 384 aaPredicted RBP27.19■■□□□ 1.94
CHFR-218ENST00000540963 FAXCQ5TGI0 409 aa27.19■■□□□ 1.94
CHFR-218ENST00000540963 FAM71AQ8IYT1 594 aa27.19■■□□□ 1.94
CHFR-218ENST00000540963 SCG3Q8WXD2 468 aaKnown RBP27.19■■□□□ 1.94
CHFR-218ENST00000540963 ARHGEF2Q92974 986 aaKnown RBP27.19■■□□□ 1.94
CHFR-218ENST00000540963 CLPBQ9H078 707 aa27.19■■□□□ 1.94
CHFR-218ENST00000540963 AHCTF1Q8WYP5 2266 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 BIN1O00499 593 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 TSHRP16473 764 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 MAPKAPK2P49137 400 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 PPARDQ03181 441 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 C1orf61Q13536 156 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 ELOCQ15369 112 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 XYLT1Q86Y38 959 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 DRC7Q8IY82 874 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 RYBPQ8N488 228 aaPredicted RBP27.18■■□□□ 1.94
CHFR-218ENST00000540963 ARL10Q8N8L6 244 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 STRADBQ9C0K7 418 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 PLCB1Q9NQ66 1216 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 RWDD2AQ9UIY3 292 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 GGT7Q9UJ14 662 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 DNAJC12Q9UKB3 198 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 PNMA8BQ9ULN7 279 aaPredicted RBP27.18■■□□□ 1.94
CHFR-218ENST00000540963 ITM2BQ9Y287 266 aa27.18■■□□□ 1.94
CHFR-218ENST00000540963 TM7SF2O76062 418 aa27.17■■□□□ 1.94
CHFR-218ENST00000540963 GJB6O95452 261 aa27.17■■□□□ 1.94
CHFR-218ENST00000540963 ITGB2P05107 769 aa27.17■■□□□ 1.94
CHFR-218ENST00000540963 ALPIP09923 528 aa27.17■■□□□ 1.94
CHFR-218ENST00000540963 FLT3P36888 993 aa27.17■■□□□ 1.94
CHFR-218ENST00000540963 EIF4A3P38919 411 aaKnown RBP27.17■■□□□ 1.94
CHFR-218ENST00000540963 PEX5P50542 639 aa27.17■■□□□ 1.94
CHFR-218ENST00000540963 FBXO39Q8N4B4 442 aa27.17■■□□□ 1.94
CHFR-218ENST00000540963 OR6C4Q8NGE1 309 aa27.17■■□□□ 1.94
CHFR-218ENST00000540963 VOPP1Q96AW1 172 aa27.17■■□□□ 1.94
CHFR-218ENST00000540963 PDCL3Q9H2J4 239 aa27.17■■□□□ 1.94
CHFR-218ENST00000540963 SIX2Q9NPC8 291 aa27.17■■□□□ 1.94
CHFR-218ENST00000540963 HPCAL4Q9UM19 191 aa27.17■■□□□ 1.94
CHFR-218ENST00000540963 SCN8AQ9UQD0 1980 aa27.17■■□□□ 1.94
CHFR-218ENST00000540963 TMEM110-MUSTN1A8MSY1 372 aa27.16■■□□□ 1.94
CHFR-218ENST00000540963 KRIT1O00522 736 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms