RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 CTSLP07711 333 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 CKMT2P17540 419 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 SERPINA4P29622 427 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 HSPA9P38646 679 aaKnown RBP10.54□□□□□ -0.72
CDCA3-208ENST00000540683 CSNK1DP48730 415 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 BLKP51451 505 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 TAS2R38P59533 333 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 RPL7AP62424 266 aaKnown RBP10.54□□□□□ -0.72
CDCA3-208ENST00000540683 ZBED6P86452 979 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 ZNF211Q13398 564 aaPredicted RBP10.54□□□□□ -0.72
CDCA3-208ENST00000540683 NR1I3Q14994 352 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 TMEM259Q4ZIN3 620 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 ABI3BPQ7Z7G0 1075 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 PHLDB2Q86SQ0 1253 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 PARGQ86W56 976 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 CACTIN-AS1Q8N1I8 211 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 CHST14Q8NCH0 376 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 TMEM131Q92545 1883 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 ARRDC3Q96B67 414 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 ZNF653Q96CK0 615 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 ZNF599Q96NL3 588 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 CALN1Q9BXU9 219 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 TM6SF2Q9BZW4 377 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 DHX35Q9H5Z1 703 aaKnown RBP10.54□□□□□ -0.72
CDCA3-208ENST00000540683 ATP13A3Q9H7F0 1226 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 TMPRSS4Q9NRS4 437 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 ZNHIT6Q9NWK9 470 aaKnown RBP10.54□□□□□ -0.72
CDCA3-208ENST00000540683 DKK4Q9UBT3 224 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 CNOT8Q9UFF9 292 aaKnown RBP10.54□□□□□ -0.72
CDCA3-208ENST00000540683 IP6K2Q9UHH9 426 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 KLK13Q9UKR3 277 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 FCF1Q9Y324 198 aaKnown RBP10.54□□□□□ -0.72
CDCA3-208ENST00000540683 LUC7L2Q9Y383 392 aaKnown RBP10.54□□□□□ -0.72
CDCA3-208ENST00000540683 FADS3Q9Y5Q0 445 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 CSNK1G3Q9Y6M4 447 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 TP53BP1Q12888 1972 aaPredicted RBP10.54□□□□□ -0.72
CDCA3-208ENST00000540683 KMT2BQ9UMN6 2715 aaPredicted RBP10.53□□□□□ -0.72
CDCA3-208ENST00000540683 CFAP69A5D8W1 941 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 TMCO5BA8MYB1 307 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 C1QTNF9BB2RNN3 333 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 TEX33O43247 280 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 ZNF821O75541 412 aaPredicted RBP10.53□□□□□ -0.72
CDCA3-208ENST00000540683 TM7SF2O76062 418 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 WNT1P04628 370 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 ATXN1LP0C7T5 689 aaKnown RBP10.53□□□□□ -0.72
CDCA3-208ENST00000540683 C1QTNF9P0C862 333 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 GLDCP23378 1020 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 HTR1BP28222 390 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 ACVRL1P37023 503 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 RPIAP49247 311 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 NUMBP49757 651 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 THOP1P52888 689 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 FAM193AP78312 1265 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 DAB2P98082 770 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 NSUN2Q08J23 767 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDCA3-208ENST00000540683 DSG2Q14126 1118 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 SMAD1Q15797 465 aaKnown RBP10.53□□□□□ -0.72
CDCA3-208ENST00000540683 HADHQ16836 314 aaKnown RBP10.53□□□□□ -0.72
CDCA3-208ENST00000540683 RALGPS1Q5JS13 557 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 PTAR1Q7Z6K3 402 aaPredicted RBP10.53□□□□□ -0.72
CDCA3-208ENST00000540683 SDR16C5Q8N3Y7 309 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 PIP4P2Q8N4L2 257 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 SCG3Q8WXD2 468 aaKnown RBP10.53□□□□□ -0.72
CDCA3-208ENST00000540683 GRAMD1AQ96CP6 724 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 NXPE2Q96DL1 559 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 TBATAQ96M53 351 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 SYT11Q9BT88 431 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDCA3-208ENST00000540683 C1QTNF2Q9BXJ5 285 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 FAM117AQ9C073 453 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 ISCUQ9H1K1 167 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 EBF2Q9HAK2 575 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 SP110Q9HB58 689 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 ZMIZ1Q9ULJ6 1067 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 TRPM6Q9BX84 2022 aa10.53□□□□□ -0.72
CDCA3-208ENST00000540683 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.52□□□□□ -0.73
CDCA3-208ENST00000540683 SYCE3A1L190 88 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 GOLGA8CPA6NN73 597 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 FAM72CH0Y354 149 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 MYO1FO00160 1098 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 PLK4O00444 970 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 PRAMEF11O60813 436 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 PALMO75781 387 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 PAK4O96013 591 aaPredicted RBP10.52□□□□□ -0.73
CDCA3-208ENST00000540683 UGT2B4P06133 528 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 GP1BAP07359 652 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 JUPP14923 745 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 PRLRP16471 622 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 PEX5P50542 639 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 FANCCQ00597 558 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 IL9RQ01113 521 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 IQCB1Q15051 598 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 PPP6R3Q5H9R7 873 aaPredicted RBP10.52□□□□□ -0.73
CDCA3-208ENST00000540683 KCNT1Q5JUK3 1230 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 FAM72AQ5TYM5 149 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 FAM72DQ6L9T8 149 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 TMCO3Q6UWJ1 677 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 LAYNQ6UX15 382 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 Q6ZSR6 202 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 RFX8Q6ZV50 586 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms