RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 TMEM59LQ9UK28 342 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 PNMA8BQ9ULN7 279 aaPredicted RBP15.23■□□□□ 0.03
USB1-203ENST00000539737 COL12A1Q99715 3063 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 BSNQ9UPA5 3926 aa15.23■□□□□ 0.03
USB1-203ENST00000539737 PTPN13Q12923 2485 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 A0A0D9SEW6 157 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 ANKRD62A6NC57 917 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 M0QYT0 321 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 SPINT1O43278 529 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 PAGE1O75459 146 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 SKILP12757 684 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 GKP32189 559 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 CHRNA3P32297 505 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 FLT3P36888 993 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 C1orf61Q13536 156 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 FZD2Q14332 565 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 TSR1Q2NL82 804 aaKnown RBP15.22■□□□□ 0.03
USB1-203ENST00000539737 ARSIQ5FYB1 569 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 ACBD5Q5T8D3 534 aaPredicted RBP15.22■□□□□ 0.03
USB1-203ENST00000539737 FAM46CQ5VWP2 391 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 HGSNATQ68CP4 663 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 TFAP2DQ7Z6R9 452 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 DRC7Q8IY82 874 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 ATP11CQ8NB49 1132 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 LSM14AQ8ND56 463 aaKnown RBP15.22■□□□□ 0.03
USB1-203ENST00000539737 ZNF548Q8NEK5 533 aaPredicted RBP15.22■□□□□ 0.03
USB1-203ENST00000539737 NT5C3BQ969T7 300 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 PRR11Q96HE9 360 aaPredicted RBP15.22■□□□□ 0.03
USB1-203ENST00000539737 ZNF578Q96N58 590 aaPredicted RBP15.22■□□□□ 0.03
USB1-203ENST00000539737 DEPDC7Q96QD5 511 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 DNAJC7Q99615 494 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 MUC3BQ9H195 1237 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 SYNDIG1Q9H7V2 258 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 POLR1BQ9H9Y6 1135 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 PREBQ9HCU5 417 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 ZNHIT6Q9NWK9 470 aaKnown RBP15.22■□□□□ 0.03
USB1-203ENST00000539737 VPS51Q9UID3 782 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 ITM2BQ9Y287 266 aa15.22■□□□□ 0.03
USB1-203ENST00000539737 DDX3XO00571 662 aaKnown RBP eCLIP15.21■□□□□ 0.032e-15■■■■■ 27.4
USB1-203ENST00000539737 SCAMP1O15126 338 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 MFAP3LO75121 409 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 ADCY5O95622 1261 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 PAK4O96013 591 aaPredicted RBP15.21■□□□□ 0.03
USB1-203ENST00000539737 KRT3P12035 628 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 DESP17661 470 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 HNRNPA2B1P22626 353 aaKnown RBP15.21■□□□□ 0.03
USB1-203ENST00000539737 SDC4P31431 198 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 HNRNPH3P31942 346 aaKnown RBP15.21■□□□□ 0.03
USB1-203ENST00000539737 LSSP48449 732 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 DEUP1Q05D60 604 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 ISXQ2M1V0 245 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 LRRC73Q5JTD7 316 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 BRMS1LQ5PSV4 323 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 BROXQ5VW32 411 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 LRRC31Q6UY01 552 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 DSG4Q86SJ6 1040 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 GAS2L3Q86XJ1 694 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 CNGA4Q8IV77 575 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 MCOLN2Q8IZK6 566 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 CACTIN-AS1Q8N1I8 211 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 OR7D4Q8NG98 312 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 OR8K1Q8NGG5 319 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 ABCG4Q9H172 646 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 KDM4CQ9H3R0 1056 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 WDCPQ9H6R7 721 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 TAS2R14Q9NYV8 317 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 MPP6Q9NZW5 540 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 ENTPD2Q9Y5L3 495 aa15.21■□□□□ 0.03
USB1-203ENST00000539737 C2CD4BA6NLJ0 364 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 TMCO5BA8MYB1 307 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 SLC28A2O43868 658 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 MAGEC1O60732 1142 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 CLDN11O75508 207 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 CELA2BP08218 269 aaPredicted RBP15.2■□□□□ 0.02
USB1-203ENST00000539737 MYBL1P10243 752 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 AKT2P31751 481 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 PTPN9P43378 593 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 VAC14Q08AM6 782 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 OVGP1Q12889 678 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 DPY19L3Q6ZPD9 716 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 ABI3BPQ7Z7G0 1075 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 EMC1Q8N766 993 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 NETO2Q8NC67 525 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 OR6K2Q8NGY2 324 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 LMX1AQ8TE12 382 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 MRFAP1L1Q96HT8 127 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 CFAP57Q96MR6 1250 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 TBCBQ99426 244 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 PIGVQ9NUD9 493 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 ABHD10Q9NUJ1 306 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 NLGN3Q9NZ94 848 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 TPX2Q9ULW0 747 aaKnown RBP15.2■□□□□ 0.02
USB1-203ENST00000539737 FARP1Q9Y4F1 1045 aaPredicted RBP15.2■□□□□ 0.02
USB1-203ENST00000539737 SCINQ9Y6U3 715 aa15.2■□□□□ 0.02
USB1-203ENST00000539737 AHCTF1Q8WYP5 2266 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 TCRBV5S1A1TA0A578 114 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 SIGLEC16A6NMB1 481 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 B8ZZF3 427 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 MUSKO15146 869 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 ZNF821O75541 412 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms