RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 INSCQ1MX18 579 aa12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 FRA10AC1Q70Z53 315 aa12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 CPSF7Q8N684 471 aaKnown RBP12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 SAMD3Q8N6K7 520 aa12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 GMCL1P1Q8NEA9 526 aa12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 LILRB4Q8NHJ6 448 aa12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 PSMA8Q8TAA3 256 aa12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 HDAC10Q969S8 669 aa12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 EFHD2Q96C19 240 aaPredicted RBP12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 CERS2Q96G23 380 aa12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 ZNF668Q96K58 619 aaPredicted RBP12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 TWNKQ96RR1 684 aa12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 SEPHS2Q99611 448 aa12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 FBRSL1Q9HCM7 1045 aaKnown RBP12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 FAM49BQ9NUQ9 324 aa12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 FAM198AQ9UFP1 575 aa12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 MAGED1Q9Y5V3 778 aaPredicted RBP12.33□□□□□ -0.44
PRKCQ-203ENST00000539722 HSPA8P11142 646 aaKnown RBP12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 CHRNB1P11230 501 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 NCK1P16333 377 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 CLK3P49761 638 aaKnown RBP12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 YWHAEP62258 255 aaKnown RBP12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 CLDN10P78369 228 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 RFTN1Q14699 578 aaPredicted RBP12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 CYBRD1Q53TN4 286 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 HEATR6Q6AI08 1181 aaKnown RBP12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 UGT3A1Q6NUS8 523 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 SWSAP1Q6NVH7 229 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 RFPL4BQ6ZWI9 263 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 ITIH5Q86UX2 942 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 DEPDC4Q8N2C3 294 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 CGRRF1Q99675 332 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 CCDC90BQ9GZT6 254 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 VRTNQ9H8Y1 702 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 TNFRSF10AO00220 468 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 INPP4BO15327 924 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 FASP25445 335 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 SERPINB1P30740 379 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 TBPL2Q6SJ96 375 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 AKAP14Q86UN6 197 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 MFSD3Q96ES6 412 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 MAGED4Q96JG8 741 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 ZNF641Q96N77 438 aaPredicted RBP12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 PSD2Q9BQI7 771 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 SNRNP25Q9BV90 132 aaKnown RBP12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 NIF3L1Q9GZT8 377 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 BOLA1Q9Y3E2 137 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 ZFC3H1O60293 1989 aaKnown RBP12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 TAF4O00268 1085 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 SDHDO14521 159 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 SRP72O76094 671 aaKnown RBP12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 ALDH1A2O94788 518 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 YWHAQP27348 245 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 ADSLP30566 484 aaPredicted RBP12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 SHMT2P34897 504 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 CAPGP40121 348 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 CRKP46108 304 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 PLK1P53350 603 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 TMBIM6P55061 237 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 CNTN2Q02246 1040 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 PRKAA1Q13131 559 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 XAF1Q6GPH4 301 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 PLEKHG7Q6ZR37 379 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 MFSD2AQ8NA29 543 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 COLGALT1Q8NBJ5 622 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 RAB2BQ8WUD1 216 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 MASTLQ96GX5 879 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 ZNF486Q96H40 463 aaPredicted RBP12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 SEZ6LQ9BYH1 1024 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 ALOXE3Q9BYJ1 711 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 TNFRSF12AQ9NP84 129 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 EXD2Q9NVH0 621 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 DKK3Q9UBP4 350 aa12.32□□□□□ -0.44
PRKCQ-203ENST00000539722 MICAL3Q7RTP6 2002 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 BCLAF3A2AJT9 711 aaKnown RBP12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 PTGES3LE9PB15 166 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 G3V3G9 751 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 K7ERI5 159 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 POLRMTO00411 1230 aaKnown RBP12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 SBK3P0C264 359 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 MBL2P11226 248 aaPredicted RBP12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 BMP4P12644 408 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 GPD1P21695 349 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 CYP2F1P24903 491 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 HTR1BP28222 390 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 HLCSP50747 726 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 RACK1P63244 317 aaKnown RBP12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 ACAP2Q15057 778 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 ZNF699Q32M78 642 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 CCDC58Q4VC31 144 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 DCAF8Q5TAQ9 597 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 TERB1Q8NA31 727 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 OR52K1Q8NGK4 314 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 SDCCAG3Q96C92 435 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 TAAR1Q96RJ0 339 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 UHRF1Q96T88 793 aaPredicted RBP12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 RBBP8Q99708 897 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 ZNF518BQ9C0D4 1074 aa12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 SMPD3Q9NY59 655 aaPredicted RBP12.31□□□□□ -0.44
PRKCQ-203ENST00000539722 GIMAP2Q9UG22 337 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms