RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 BTBD10Q9BSF8 475 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 TLR9Q9NR96 1032 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 SYBUQ9NX95 663 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 CCL16O15467 120 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 SPAG6O75602 509 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 MAPKAPK2P49137 400 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 SLC10A7Q0GE19 358 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 CAMK1Q14012 370 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 MUM1Q2TAK8 710 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 ADGRF1Q5T601 910 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 TRMT10BQ6PF06 316 aaKnown RBP17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 MFN1Q8IWA4 741 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 ADAMTS19Q8TE59 1207 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 TUBB6Q9BUF5 446 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 SP110Q9HB58 689 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 STOML1Q9UBI4 398 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 OBSL1O75147 1896 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 A0A0D9SEW6 157 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 ERI2A8K979 691 aaKnown RBP17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 H3BNC9 293 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 GRM6O15303 877 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 MAP3K13O43283 966 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 CLCN4P51793 760 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 HNRNPDQ14103 355 aaKnown RBP17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 PRPSAP1Q14558 356 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 LRRC6Q86X45 466 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 DNAAF3Q8N9W5 541 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 CFAP61Q8NHU2 1237 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 FCRL5Q96RD9 977 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 CORO1BQ9BR76 489 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 TSSK1BQ9BXA7 367 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 MTIF3Q9H2K0 278 aaKnown RBP17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 SMYD2Q9NRG4 433 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 CPQQ9Y646 472 aa17.31■□□□□ 0.36
PCDHB17P-201ENST00000539533 DOCK6Q96HP0 2047 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 A0A1W2PRU2 124 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 CXorf49A8MYA2 514 aaPredicted RBP17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 NVLO15381 856 aaKnown RBP17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 OLFM2O95897 454 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 RPS6KA3P51812 740 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 ARFIP2P53365 341 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 SERINC3Q13530 473 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 ANO4Q32M45 955 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 PARP15Q460N3 678 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 STXBP5Q5T5C0 1151 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 UNC5BQ8IZJ1 945 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 ATXN3LQ9H3M9 355 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 CASS4Q9NQ75 786 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 HCFC1R1Q9NWW0 138 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 NMRK1Q9NWW6 199 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 PCDHA11Q9Y5I1 949 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 GSC2O15499 205 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 RFPL2O75678 378 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 MYL4P12829 197 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 TPH1P17752 444 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 VHLP40337 213 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 RENBPP51606 427 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 SESN3P58005 492 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 YBEYP58557 167 aaPredicted RBP17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 MAXP61244 160 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 ROR2Q01974 943 aaKnown RBP17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 KLC1Q07866 573 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 CCDC6Q16204 474 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 RABGAP1LQ5R372 815 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 MARC1Q5VT66 337 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 CES3Q6UWW8 571 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 GSDMBQ8TAX9 411 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 MRPS31Q92665 395 aaKnown RBP17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 SKA1Q96BD8 255 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 NSL1Q96IY1 281 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 LRRC40Q9H9A6 602 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 PIDD1Q9HB75 910 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 NT5MQ9NPB1 228 aa17.3■□□□□ 0.36
PCDHB17P-201ENST00000539533 GYG2O15488 501 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 GREM1O60565 184 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 DNAJC6O75061 913 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 MT-ND3P03897 115 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 SERPINB3P29508 390 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 CDH4P55283 916 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 RCN1Q15293 331 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 CERCAMQ5T4B2 595 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 TMEM154Q6P9G4 183 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 CTAGE3PQ8IX95 158 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 OR7D4Q8NG98 312 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 HTATIP2Q9BUP3 242 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 TMEM120AQ9BXJ8 343 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 MTO1Q9Y2Z2 717 aaKnown RBP17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 AAR2Q9Y312 384 aaKnown RBP17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 LPXNO60711 386 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 FAM155BO75949 473 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 CKMP06732 381 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 PRKCHP24723 683 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 ETFBP38117 255 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 ZBTB16Q05516 673 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 LBRQ14739 615 aaKnown RBP17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 KPNB1Q14974 876 aaKnown RBP17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 PPM1LQ5SGD2 360 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 KLHDC8BQ8IXV7 354 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 ELMOD1Q8N336 334 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 PPM1NQ8N819 430 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms