RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 GULP1Q9UBP9 304 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 STAP1Q9ULZ2 295 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 PADI4Q9UM07 663 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 SCN8AQ9UQD0 1980 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 BSNQ9UPA5 3926 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 UBR5O95071 2799 aaPredicted RBP14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 IGLV3-10A0A075B6K4 115 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 ILVBLA1L0T0 632 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 LMO7DNF2Z398 122 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 AGRPO00253 132 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 PLD2O14939 933 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 YY2O15391 372 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 EFSO43281 561 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 CELA2BP08218 269 aaPredicted RBP14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 HGFP14210 728 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 TSHRP16473 764 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 SLC5A2P31639 672 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 KRT9P35527 623 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 IGFALSP35858 605 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 MLLT3P42568 568 aaPredicted RBP14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 SNX16P57768 344 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 GNA12Q03113 381 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 C1QBPQ07021 282 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 PAK1Q13153 545 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 SRSF6Q13247 344 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 PTK2BQ14289 1009 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 TGIF1Q15583 401 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 ESRP1Q6NXG1 681 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 USP53Q70EK8 1073 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 ZSCAN30Q86W11 494 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 CREBRFQ8IUR6 639 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 KYQ8NBH2 561 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 DENND6BQ8NEG7 585 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 ZNF397Q8NF99 534 aaPredicted RBP14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 WDR48Q8TAF3 677 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 SHC3Q92529 594 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 EXTL1Q92935 676 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 ARHGAP9Q9BRR9 750 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 CLPBQ9H078 707 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 RRN3Q9NYV6 651 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 APEX2Q9UBZ4 518 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 DOLKQ9UPQ8 538 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 PAXBP1Q9Y5B6 917 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 CHD5Q8TDI0 1954 aa14.23□□□□□ -0.13
SMARCA4-206ENST00000538456 UNC13CQ8NB66 2214 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 LRP4O75096 1905 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 KRIT1O00522 736 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 F9P00740 461 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 UGT2B4P06133 528 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 PNMA6AP0CW24 399 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 UGT1A5P35504 534 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 PTK2Q05397 1052 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 SLC20A2Q08357 652 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 LINC00303Q3SY05 128 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 ZNF805Q5CZA5 627 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 ZNF783Q6ZMS7 281 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 LEKR1Q6ZMV7 388 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 RAB11FIP2Q7L804 512 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 SLC47A2Q86VL8 602 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 FBXO39Q8N4B4 442 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 PCDH19Q8TAB3 1148 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 RAB7BQ96AH8 199 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 CCDC74AQ96AQ1 378 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 CENPTQ96BT3 561 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 LIN37Q96GY3 246 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 FAM81BQ96LP2 452 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 C1orf74Q96LT6 269 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 TIGD1Q96MW7 591 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 GFM1Q96RP9 751 aaKnown RBP14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 ZYG11BQ9C0D3 744 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 ZNF212Q9UDV6 495 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 IL17BQ9UHF5 180 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 RABGEF1Q9UJ41 708 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 AJAP1Q9UKB5 411 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 LRRK1Q38SD2 2015 aa14.22□□□□□ -0.13
SMARCA4-206ENST00000538456 DOPEY2Q9Y3R5 2298 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 D6RAR5 112 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 NTN3O00634 580 aaPredicted RBP14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 MMP20O60882 483 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 GJB6O95452 261 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 RPLP0P05388 317 aaKnown RBP14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 FAM87AP0C7U9 286 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 ACVRL1P37023 503 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 EIF4A3P38919 411 aaKnown RBP14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 PPARDQ03181 441 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 SLC25A52Q3SY17 297 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 ARTNQ5T4W7 220 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 FAM102AQ5T9C2 384 aaPredicted RBP14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 FOXR2Q6PJQ5 311 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 MACC1Q6ZN28 852 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 GBP6Q6ZN66 633 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 FAM131BQ86XD5 332 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 ZDHHC17Q8IUH5 632 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 SDR16C5Q8N3Y7 309 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 ARL10Q8N8L6 244 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 ASB12Q8WXK4 309 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 NT5C3BQ969T7 300 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 SGF29Q96ES7 293 aa14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 PGAP3Q96FM1 320 aaPredicted RBP14.21□□□□□ -0.13
SMARCA4-206ENST00000538456 MBNL1Q9NR56 388 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms