RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 SPON2Q9BUD6 331 aa10.4□□□□□ -0.74
VPS37C-204ENST00000538036 C1QTNF7Q9BXJ2 289 aa10.4□□□□□ -0.74
VPS37C-204ENST00000538036 RETREG1Q9H6L5 497 aa10.4□□□□□ -0.74
VPS37C-204ENST00000538036 SYNCQ9H7C4 482 aa10.4□□□□□ -0.74
VPS37C-204ENST00000538036 CAAP1Q9H8G2 361 aa10.4□□□□□ -0.74
VPS37C-204ENST00000538036 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.4□□□□□ -0.74
VPS37C-204ENST00000538036 SEPT10Q9P0V9 454 aa10.4□□□□□ -0.74
VPS37C-204ENST00000538036 HECAQ9UBI9 543 aaPredicted RBP10.4□□□□□ -0.74
VPS37C-204ENST00000538036 AHCTF1Q8WYP5 2266 aa10.4□□□□□ -0.75
VPS37C-204ENST00000538036 TRPM6Q9BX84 2022 aa10.4□□□□□ -0.75
VPS37C-204ENST00000538036 PMS2P1A4D2B8 440 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 GOLGA6L4A6NEF3 574 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 C16orf96A6NNT2 1141 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 TMEM110-MUSTN1A8MSY1 372 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 SUV39H1O43463 412 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 NOBOXO60393 691 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 ENDOD1O94919 500 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 FGFR1OPO95684 399 aaKnown RBP10.39□□□□□ -0.75
VPS37C-204ENST00000538036 ALPIP09923 528 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 LIPCP11150 499 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 CCKBRP32239 447 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 UGT1A5P35504 534 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 KRT9P35527 623 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 SCNN1AP37088 669 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 USP8P40818 1118 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 PEX5P50542 639 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 PPARDQ03181 441 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 PTK2Q05397 1052 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 SRSF1Q07955 248 aaKnown RBP eCLIP10.39□□□□□ -0.75
VPS37C-204ENST00000538036 ELOCQ15369 112 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 KLHL40Q2TBA0 621 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 TPRG1LQ5T0D9 272 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 FAXCQ5TGI0 409 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 CRTC1Q6UUV9 634 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 MACC1Q6ZN28 852 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 PARS2Q7L3T8 475 aaKnown RBP10.39□□□□□ -0.75
VPS37C-204ENST00000538036 TFAP2DQ7Z6R9 452 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 RBFAQ8N0V3 343 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 ARL10Q8N8L6 244 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 ZSCAN1Q8NBB4 408 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 OR7D4Q8NG98 312 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 GFM1Q96RP9 751 aaKnown RBP10.39□□□□□ -0.75
VPS37C-204ENST00000538036 LRRC61Q9BV99 259 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 OSBPL1AQ9BXW6 950 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 ATP13A1Q9HD20 1204 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 ACP6Q9NPH0 428 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 MPP6Q9NZW5 540 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 DOLKQ9UPQ8 538 aa10.39□□□□□ -0.75
VPS37C-204ENST00000538036 BECN2A8MW95 431 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 D6RAR5 112 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 I6L893 689 aaPredicted RBP10.38□□□□□ -0.75
VPS37C-204ENST00000538036 AREL1O15033 823 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 POP4O95707 220 aaKnown RBP10.38□□□□□ -0.75
VPS37C-204ENST00000538036 ERBB2P04626 1255 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 NTRK1P04629 796 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 CD44P16070 742 aaKnown RBP10.38□□□□□ -0.75
VPS37C-204ENST00000538036 TSHRP16473 764 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 ITGB6P18564 788 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 EIF4A3P38919 411 aaKnown RBP10.38□□□□□ -0.75
VPS37C-204ENST00000538036 ARF5P84085 180 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 GNA12Q03113 381 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 DEUP1Q05D60 604 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 C1orf61Q13536 156 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 POLD3Q15054 466 aaPredicted RBP10.38□□□□□ -0.75
VPS37C-204ENST00000538036 SLC25A52Q3SY17 297 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 OTUD1Q5VV17 481 aaPredicted RBP10.38□□□□□ -0.75
VPS37C-204ENST00000538036 TRIM65Q6PJ69 517 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 ZNF574Q6ZN55 896 aaPredicted RBP10.38□□□□□ -0.75
VPS37C-204ENST00000538036 JAMLQ86YT9 394 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 NELFBQ8WX92 580 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 SHC3Q92529 594 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 ZYG11BQ9C0D3 744 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 B3GNT4Q9C0J1 378 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 CLPBQ9H078 707 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 ZDHHC6Q9H6R6 413 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 EPB41L5Q9HCM4 733 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 ANLNQ9NQW6 1124 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 PPARGC1AQ9UBK2 798 aaKnown RBP10.38□□□□□ -0.75
VPS37C-204ENST00000538036 GULP1Q9UBP9 304 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 APEX2Q9UBZ4 518 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 ZNF212Q9UDV6 495 aa10.38□□□□□ -0.75
VPS37C-204ENST00000538036 PPP1R3GB7ZBB8 358 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 SRGAP2O75044 1071 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 TM7SF2O76062 418 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 GSRP00390 522 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 JMJD7P0C870 316 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 CTSEP14091 401 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 CD82P27701 267 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 HTR1BP28222 390 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 ABL2P42684 1182 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 SULT1E1P49888 294 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 SUOXP51687 545 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 HK3P52790 923 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 RP1P56715 2156 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 BPIFB4P59827 614 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 SNRPD1P62314 119 aaKnown RBP10.37□□□□□ -0.75
VPS37C-204ENST00000538036 DRAP1Q14919 205 aaPredicted RBP10.37□□□□□ -0.75
VPS37C-204ENST00000538036 ARHGAP44Q17R89 818 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 MYLK3Q32MK0 819 aa10.37□□□□□ -0.75
VPS37C-204ENST00000538036 KLHL10Q6JEL2 608 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms