RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ABI1Q8IZP0 508 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PTCD3Q96EY7 689 aaKnown RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 HPDLQ96IR7 371 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF560Q96MR9 790 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF350Q9GZX5 532 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 DSN1Q9H410 356 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 XKR8Q9H6D3 395 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 CCNB1IP1Q9NPC3 277 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 TBC1D14Q9P2M4 693 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 MALT1Q9UDY8 824 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 LEF1Q9UJU2 399 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 DRG1Q9Y295 367 aaKnown RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 CNTNAP5Q8WYK1 1306 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 GPC1P35052 558 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 BOLA3Q53S33 107 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PRR5LQ6MZQ0 368 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 GK5Q6ZS86 529 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PTCHD4Q6ZW05 846 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF614Q8N883 585 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 CDH19Q9H159 772 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 NT5MQ9NPB1 228 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 LRRC4BQ9NT99 713 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 RDH8Q9NYR8 311 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 MTF2Q9Y483 593 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ATP10AO60312 1499 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 MBD5Q9P267 1494 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PLA2G6O60733 806 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 ANXA9O76027 345 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 GRIA4P48058 902 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 ANTXR2P58335 489 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF549Q6P9A3 640 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 HPS6Q86YV9 775 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 ZZZ3Q8IYH5 903 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 PIWIL2Q8TC59 973 aaKnown RBP5.71□□□□□ -1.49
CSMD1-215ENST00000537824 ADI1Q9BV57 179 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 TMLHEQ9NVH6 421 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 EIF3KQ9UBQ5 218 aaKnown RBP5.71□□□□□ -1.49
CSMD1-215ENST00000537824 ANKRD26Q9UPS8 1709 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 MALRD1Q5VYJ5 2156 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 CLPXO76031 633 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 METTL18O95568 372 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 CDH1P12830 882 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 ACADVLP49748 655 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 BNIP2Q12982 314 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 PEX6Q13608 980 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 MYBPC3Q14896 1274 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 MFSD7Q6UXD7 560 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF467Q7Z7K2 595 aaPredicted RBP5.71□□□□□ -1.49
CSMD1-215ENST00000537824 SLC41A1Q8IVJ1 513 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF655Q8N720 491 aaPredicted RBP5.71□□□□□ -1.49
CSMD1-215ENST00000537824 TNFAIP8L1Q8WVP5 186 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 BAP1Q92560 729 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 MSANTD3Q96H12 275 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 CIB1Q99828 191 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 SLC22A4Q9H015 551 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 IL25Q9H293 177 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 SLC35C2Q9NQQ7 365 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 PCDHA3Q9Y5H8 950 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 PPRC1Q5VV67 1664 aaKnown RBP5.71□□□□□ -1.49
CSMD1-215ENST00000537824 AURKAO14965 403 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 CDH4P55283 916 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 RBBP4Q09028 425 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 FSTL1Q12841 308 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 RPA4Q13156 261 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 MTA1Q13330 715 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 FAM187BQ17R55 369 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 FBXO42Q6P3S6 717 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 DSELQ8IZU8 1212 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 EBF2Q9HAK2 575 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 JPH1Q9HDC5 661 aaPredicted RBP5.71□□□□□ -1.49
CSMD1-215ENST00000537824 AP4E1Q9UPM8 1137 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 CSADQ9Y600 493 aa5.71□□□□□ -1.49
CSMD1-215ENST00000537824 A0A0B4J269 797 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 OR6C70A6NIJ9 312 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 PSKH1P11801 424 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 CCNB1P14635 433 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF14P17017 642 aaPredicted RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 PGAM1P18669 254 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 HALP42357 657 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 CCNYL2Q5T2Q4 361 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 ANO7Q6IWH7 933 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 XKR5Q6UX68 686 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 ART4Q93070 314 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 HAVCR1Q96D42 359 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF408Q9H9D4 720 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 TREM1Q9NP99 234 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 GIT1Q9Y2X7 761 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 RPTORQ8N122 1335 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 ILVBLA1L0T0 632 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 H7C2Y5 167 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 CRYZL1O95825 349 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 PLATP00750 562 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 CD151P48509 253 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 SWSAP1Q6NVH7 229 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 KCNMB4Q86W47 210 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 POP1Q99575 1024 aaKnown RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 CNPPD1Q9BV87 410 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 NT5C1AQ9BXI3 368 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 GPN1Q9HCN4 374 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms