RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 STK38LQ9Y2H1 464 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 MYO18AQ92614 2054 aaKnown RBP13.72□□□□□ -0.21
SMG6-203ENST00000536871 GYG2O15488 501 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 CNTN5O94779 1100 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 CBX6O95503 412 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 PRKCGP05129 697 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 ATF6P18850 670 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 KCNA4P22459 653 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 CD86P42081 329 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 GATMP50440 423 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 SLC10A7Q0GE19 358 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 CNGA3Q16281 694 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 DNAL1Q4LDG9 190 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 ESRP1Q6NXG1 681 aaKnown RBP13.72□□□□□ -0.21
SMG6-203ENST00000536871 RSPO2Q6UXX9 243 aaPredicted RBP13.72□□□□□ -0.21
SMG6-203ENST00000536871 ZNF783Q6ZMS7 281 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 SETD3Q86TU7 594 aaPredicted RBP13.72□□□□□ -0.21
SMG6-203ENST00000536871 ZNF461Q8TAF7 563 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 PDCD6IPQ8WUM4 868 aaKnown RBP13.72□□□□□ -0.21
SMG6-203ENST00000536871 N4BP2L2Q92802 583 aaPredicted RBP13.72□□□□□ -0.21
SMG6-203ENST00000536871 IFT43Q96FT9 208 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 ZNF419Q96HQ0 510 aaPredicted RBP13.72□□□□□ -0.21
SMG6-203ENST00000536871 IGSF21Q96ID5 467 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 ZNF512Q96ME7 567 aaPredicted RBP13.72□□□□□ -0.21
SMG6-203ENST00000536871 TASP1Q9H6P5 420 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 CWH43Q9H720 699 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 OXSMQ9NWU1 459 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 SEPT3Q9UH03 358 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 ARIH1Q9Y4X5 557 aaPredicted RBP13.72□□□□□ -0.21
SMG6-203ENST00000536871 FNDC1Q4ZHG4 1894 aaPredicted RBP13.71□□□□□ -0.21
SMG6-203ENST00000536871 TTC3P53804 2025 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 FAM95CA0A1B0GW59 222 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 MROH6A6NGR9 719 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 J3KR12 359 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 EFCAB14O75071 495 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 HSPA4LO95757 839 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 TBX18O95935 607 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 SOD2P04179 222 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 ALDH1A3P47895 512 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 LEPRP48357 1165 aaKnown RBP13.71□□□□□ -0.21
SMG6-203ENST00000536871 SEPT6Q14141 434 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 TAF12Q16514 161 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 FSCBQ5H9T9 825 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 LIPMQ5VYY2 423 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 TMPRSS6Q8IU80 811 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 LGI2Q8N0V4 545 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 ARRDC2Q8TBH0 407 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 GPR152Q8TDT2 470 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 B3GALT6Q96L58 329 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 ZNF778Q96MU6 729 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 ANKRD27Q96NW4 1050 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 ACE2Q9BYF1 805 aaPredicted RBP13.71□□□□□ -0.21
SMG6-203ENST00000536871 NMUR2Q9GZQ4 415 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 C1orf21Q9H246 121 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 CRISPLD1Q9H336 500 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 MFSD1Q9H3U5 465 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 TAGLN3Q9UI15 199 aa13.71□□□□□ -0.21
SMG6-203ENST00000536871 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.71□□□□□ -0.21
SMG6-203ENST00000536871 ILVBLA1L0T0 632 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 ZNF840PA6NDX5 716 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 CAPN14A8MX76 684 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 SPECC1L-ADORA2AF8WAN1 911 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 G3V2L1 256 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 ABLIM3O94929 683 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 SERPINF2P08697 491 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 AOC1P19801 751 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 OR1D2P34982 312 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 VEGFBP49765 207 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 CREMQ03060 361 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 ACVR1Q04771 509 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 ITGA9Q13797 1035 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 PCSK7Q16549 785 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 CFAP157Q5JU67 520 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 ZNF470Q6ECI4 717 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 KLC3Q6P597 504 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 PRSS55Q6UWB4 352 aaPredicted RBP13.7□□□□□ -0.22
SMG6-203ENST00000536871 ZCCHC23Q6ZST2 131 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 EP400NLQ6ZTU2 488 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 LONP2Q86WA8 852 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 MAB21L3Q8N8X9 362 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 TTC8Q8TAM2 541 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 GIPC2Q8TF65 315 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 STYXQ8WUJ0 223 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 MCUR1Q96AQ8 359 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 ATXN7L3BQ96GX2 97 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 DEFB118Q96PH6 123 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 MRPL57Q9BQC6 102 aaKnown RBP13.7□□□□□ -0.22
SMG6-203ENST00000536871 C1QTNF1Q9BXJ1 281 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 ILKAPQ9H0C8 392 aaPredicted RBP13.7□□□□□ -0.22
SMG6-203ENST00000536871 CCSER2Q9H7U1 834 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 FBXO6Q9NRD1 293 aaPredicted RBP13.7□□□□□ -0.22
SMG6-203ENST00000536871 VTI1BQ9UEU0 232 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 ZNF638Q14966 1978 aaKnown RBP13.7□□□□□ -0.22
SMG6-203ENST00000536871 VWA8A3KMH1 1905 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 NT5C1B-RDH14C9J2C7 533 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 SOAT2O75908 522 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 TOP3BO95985 862 aaKnown RBP13.7□□□□□ -0.22
SMG6-203ENST00000536871 MMP2P08253 660 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 HMBSP08397 361 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 SLC35E2BP0CK96 405 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms