RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 SETMARQ53H47 684 aaPredicted RBP14.47□□□□□ -0.09
UBE3B-206ENST00000536398 GDPD4Q6W3E5 623 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 DBX2Q6ZNG2 339 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 H2AFVQ71UI9 128 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 CASKIN2Q8WXE0 1202 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 TSC1Q92574 1164 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 GDAP1L1Q96MZ0 367 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 CSPG4P5Q96PW8 444 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 NCAPGQ9BPX3 1015 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 TRIM5Q9C035 493 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 ZNHIT6Q9NWK9 470 aaKnown RBP14.47□□□□□ -0.09
UBE3B-206ENST00000536398 CTTNBP2NLQ9P2B4 639 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 PCOLCE2Q9UKZ9 415 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 TMEM131Q92545 1883 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 TTC24A2A3L6 582 aaPredicted RBP14.46□□□□□ -0.09
UBE3B-206ENST00000536398 TMEM110-MUSTN1A8MSY1 372 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 PRAMEF26H0Y7S4 382 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 RAD51BO15315 384 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 PROSCO94903 275 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 IGSF6O95976 241 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 TPM1P09493 284 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 TIMP2P16035 220 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 IL4RP24394 825 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 GJC1P36383 396 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 ARSEP51690 589 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 NXPH1P58417 271 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 CCDC15Q0P6D6 951 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 STAT4Q14765 748 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 TRIP6Q15654 476 aaKnown RBP14.46□□□□□ -0.09
UBE3B-206ENST00000536398 TMEM259Q4ZIN3 620 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 NEK5Q6P3R8 708 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 SARM1Q6SZW1 724 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 KDM7AQ6ZMT4 941 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 GATAD2AQ86YP4 633 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 MFSD2AQ8NA29 543 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 TMEM145Q8NBT3 493 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 TSEN2Q8NCE0 465 aaKnown RBP14.46□□□□□ -0.09
UBE3B-206ENST00000536398 TEKT4Q8WW24 435 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 LRIG1Q96JA1 1093 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 NSMCE3Q96MG7 304 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 KLHL11Q9NVR0 708 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 TPX2Q9ULW0 747 aaKnown RBP14.46□□□□□ -0.09
UBE3B-206ENST00000536398 WASF3Q9UPY6 502 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 DMTF1Q9Y222 760 aa14.46□□□□□ -0.09
UBE3B-206ENST00000536398 A0A1B0GTQ1 180 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 IGLON5A6NGN9 336 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 AKR1B15C9JRZ8 316 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-206ENST00000536398 MUSKO15146 869 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 AP1G1O43747 822 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 PALMO75781 387 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 PAK4O96013 591 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-206ENST00000536398 TMEM253P0C7T8 217 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 ARL4AP40617 200 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 ZNF135P52742 658 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-206ENST00000536398 CDH6P55285 790 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 BNIP3Q12983 259 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 KRT81Q14533 505 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 TSR1Q2NL82 804 aaKnown RBP14.45□□□□□ -0.1
UBE3B-206ENST00000536398 TTC7BQ86TV6 843 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 GAS2L3Q86XJ1 694 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 PNPLA1Q8N8W4 532 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 RHBDD1Q8TEB9 315 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 CTNNBL1Q8WYA6 563 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-206ENST00000536398 FEM1CQ96JP0 617 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 CCDC42Q96M95 316 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 CNTNAP3BQ96NU0 1288 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 ELF4Q99607 663 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-206ENST00000536398 OSBPL1AQ9BXW6 950 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 CNTNAP3Q9BZ76 1288 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 SP110Q9HB58 689 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 GDF3Q9NR23 364 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 DONSONQ9NYP3 566 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 UVRAGQ9P2Y5 699 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 IPO11Q9UI26 975 aaKnown RBP14.45□□□□□ -0.1
UBE3B-206ENST00000536398 PCDHB9Q9Y5E1 797 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 PCDHGB2Q9Y5G2 931 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 CABIN1Q9Y6J0 2220 aa14.45□□□□□ -0.1
UBE3B-206ENST00000536398 AREL1O15033 823 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 PCDHGA12O60330 932 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 HNRNPA2B1P22626 353 aaKnown RBP14.44□□□□□ -0.1
UBE3B-206ENST00000536398 NUDT1P36639 197 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 CCT8P50990 548 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 RPS21P63220 83 aaKnown RBP14.44□□□□□ -0.1
UBE3B-206ENST00000536398 SEMG2Q02383 582 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 RAD51Q06609 339 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 IL10RBQ08334 325 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 SLC10A7Q0GE19 358 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 MESDQ14696 234 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 SLC45A4Q5BKX6 768 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 TMCO3Q6UWJ1 677 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 GCNT7Q6ZNI0 430 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 SLCO6A1Q86UG4 719 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 ZSWIM9Q86XI8 627 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 CAMK1DQ8IU85 385 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 TC2NQ8N9U0 490 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 OR13H1Q8NG92 308 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 BAHD1Q8TBE0 780 aaPredicted RBP14.44□□□□□ -0.1
UBE3B-206ENST00000536398 SLC35G2Q8TBE7 412 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 FAM71BQ8TC56 605 aa14.44□□□□□ -0.1
UBE3B-206ENST00000536398 SKA1Q96BD8 255 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms