RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 OCMP0CE72 109 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-203ENST00000535977 RALBP11234 206 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 ABCE1P61221 599 aaKnown RBP18.16■□□□□ 0.5
RAB40C-203ENST00000535977 CREB5Q02930 508 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 FSCN1Q16658 493 aaKnown RBP18.16■□□□□ 0.5
RAB40C-203ENST00000535977 BEND5Q7L4P6 421 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 TUBA8Q9NY65 449 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-203ENST00000535977 CROTQ9UKG9 612 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 PADI4Q9UM07 663 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 TRIP12Q14669 1992 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-203ENST00000535977 ZBTB24O43167 697 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-203ENST00000535977 NDUFB5O43674 189 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 FOXD2O60548 495 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-203ENST00000535977 APOA4P06727 396 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 USP17L7P0C7H9 530 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 CDKL1Q00532 357 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 PURAQ00577 322 aaKnown RBP18.16■□□□□ 0.5
RAB40C-203ENST00000535977 PM20D1Q6GTS8 502 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 NAPEPLDQ6IQ20 393 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 DCDC5Q6ZRR9 648 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 STRA8Q7Z7C7 330 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 C10orf107Q8IVU9 208 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 DCLK2Q8N568 766 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 RNF169Q8NCN4 708 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 ZMIZ2Q8NF64 920 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 FCRL3Q96P31 734 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-203ENST00000535977 TBC1D23Q9NUY8 699 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 FLRT1Q9NZU1 646 aa18.16■□□□□ 0.5
RAB40C-203ENST00000535977 STAMBPO95630 424 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 KCNA4P22459 653 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 COPAP53621 1224 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 CYTH1Q15438 398 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 TRIML2Q8N7C3 387 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 SCAIQ8N9R8 606 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 PPP1R2P1Q96PQ5 205 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 OSBPL2Q9H1P3 480 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 TRPC7Q9HCX4 862 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 PIH1D1Q9NWS0 290 aaKnown RBP18.15■□□□□ 0.5
RAB40C-203ENST00000535977 TMEM216Q9P0N5 145 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 C6orf203Q9P0P8 240 aaPredicted RBP18.15■□□□□ 0.5
RAB40C-203ENST00000535977 OR12D3Q9UGF7 316 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 PSMD13Q9UNM6 376 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 ZCWPW2A0A1B0GU75 182 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 MYBPHLA2RUH7 354 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 HHLA1C9JL84 531 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 ZNF23P17027 643 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 DNAJB1P25685 340 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 HTR7P34969 479 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 SLC5A3P53794 718 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 NUP107P57740 925 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 DEFB107AQ8IZN7 70 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 TSPAN14Q8NG11 270 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 TEKT5Q96M29 485 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 ZNF512Q96ME7 567 aaPredicted RBP18.15■□□□□ 0.5
RAB40C-203ENST00000535977 SLC17A6Q9P2U8 582 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 CPA4Q9UI42 421 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 CDY2AQ9Y6F7 541 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 CDY1Q9Y6F8 540 aa18.15■□□□□ 0.5
RAB40C-203ENST00000535977 TMEM114B3SHH9 223 aa18.14■□□□□ 0.5
RAB40C-203ENST00000535977 TOP3BO95985 862 aaKnown RBP18.14■□□□□ 0.5
RAB40C-203ENST00000535977 PRKAA2P54646 552 aa18.14■□□□□ 0.5
RAB40C-203ENST00000535977 BEX3Q00994 111 aa18.14■□□□□ 0.5
RAB40C-203ENST00000535977 METTL23Q86XA0 190 aa18.14■□□□□ 0.5
RAB40C-203ENST00000535977 ZNF784Q8NCA9 323 aaPredicted RBP18.14■□□□□ 0.5
RAB40C-203ENST00000535977 TSGA13Q96PP4 275 aa18.14■□□□□ 0.5
RAB40C-203ENST00000535977 RANBP9Q96S59 729 aa18.14■□□□□ 0.5
RAB40C-203ENST00000535977 TRNAU1APQ9NX07 287 aaKnown RBP18.14■□□□□ 0.5
RAB40C-203ENST00000535977 PRKCGP05129 697 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 CDH17Q12864 832 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 TUBB3Q13509 450 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 PEX6Q13608 980 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 CLPPQ16740 277 aaPredicted RBP18.14■□□□□ 0.49
RAB40C-203ENST00000535977 FSTL4Q6MZW2 842 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 KLHDC8BQ8IXV7 354 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 KCNK16Q96T55 309 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 GAD1Q99259 594 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 ST3GAL5Q9UNP4 418 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 ANKRD6Q9Y2G4 727 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 AAR2Q9Y312 384 aaKnown RBP18.14■□□□□ 0.49
RAB40C-203ENST00000535977 PCDHB12Q9Y5F1 795 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 ODC1P11926 461 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 CD68P34810 354 aaPredicted RBP18.14■□□□□ 0.49
RAB40C-203ENST00000535977 PPARGP37231 505 aaPredicted RBP18.14■□□□□ 0.49
RAB40C-203ENST00000535977 CLCNKBP51801 687 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 RAB15P59190 212 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 RARS2Q5T160 578 aaKnown RBP18.14■□□□□ 0.49
RAB40C-203ENST00000535977 CES3Q6UWW8 571 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 FBXW8Q8N3Y1 598 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 GALNT4Q8N4A0 578 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 NETO2Q8NC67 525 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 ADAM32Q8TC27 787 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 ITPKCQ96DU7 683 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 ACBD6Q9BR61 282 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 GPATCH1Q9BRR8 931 aaKnown RBP18.14■□□□□ 0.49
RAB40C-203ENST00000535977 HAUS8Q9BT25 410 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 PAIP1Q9H074 479 aaKnown RBP18.14■□□□□ 0.49
RAB40C-203ENST00000535977 TKTL2Q9H0I9 626 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 TRPV5Q9NQA5 729 aa18.14■□□□□ 0.49
RAB40C-203ENST00000535977 K7EPI3 171 aa18.13■□□□□ 0.49
RAB40C-203ENST00000535977 ITGAXP20702 1163 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms