RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 CYB5R4Q7L1T6 521 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 RRAGAQ7L523 313 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 TSPYL6Q8N831 410 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 PPHLN1Q8NEY8 458 aaKnown RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 OSR1Q8TAX0 266 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 ZCCHC10Q8TBK6 192 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 DLG5Q8TDM6 1919 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 CENPIQ92674 756 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 ARRDC3Q96B67 414 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 OTULINQ96BN8 352 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 KTI12Q96EK9 354 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 ZBED3Q96IU2 234 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 COG8Q96MW5 612 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 DEFB118Q96PH6 123 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 PARK7Q99497 189 aaKnown RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 MPHOSPH8Q99549 860 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 TUBB6Q9BUF5 446 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 TRIM31Q9BZY9 425 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 SCAND2PQ9GZW5 306 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 C11orf49Q9H6J7 331 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 VEZTQ9HBM0 779 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 WASH6PQ9NQA3 447 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 ITM2CQ9NQX7 267 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 ASNSD1Q9NWL6 643 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 ALKBH4Q9NXW9 302 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 FLRT1Q9NZU1 646 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 PDP2Q9P2J9 529 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 DBF4Q9UBU7 674 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 TSPYL4Q9UJ04 414 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 RAB21Q9UL25 225 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 MED23Q9ULK4 1368 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 DHDHQ9UQ10 334 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 PCDHGB3Q9Y5G1 929 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 PCDHA10Q9Y5I2 948 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 COPG1Q9Y678 874 aaKnown RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 PRUNE2Q8WUY3 3088 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 ALPK3Q96L96 1907 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 SALL3Q9BXA9 1300 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 MCIDASD6RGH6 385 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 F8W810 466 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 PDHXO00330 501 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 TNPO2O14787 897 aaKnown RBP3.56□□□□□ -1.84
SNHG1-202ENST00000535689 NCAM2O15394 837 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 SH3BP5O60239 455 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 PRAMEF2O60811 474 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 TULP3O75386 442 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 HOXB7P09629 217 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 WEE2P0C1S8 567 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 CYP4B1P13584 511 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 RPS6KB1P23443 525 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 ADPRHP54922 357 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 CHRNDQ07001 517 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 STIM1Q13586 685 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 PROSER3Q2NL68 480 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 GALNTL6Q49A17 601 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 CBWD5Q5RIA9 395 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 FKBP1CQ5VVH2 108 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 TMEM268Q5VZI3 342 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 IGFL4Q6B9Z1 124 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 DHRS13Q6UX07 377 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 Q6ZPA2 131 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 SYT13Q7L8C5 426 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 AMIGO2Q86SJ2 522 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 LRRTM4Q86VH4 590 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 ADGRG3Q86Y34 549 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 KLBQ86Z14 1044 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 TNIP2Q8NFZ5 429 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 REPS1Q96D71 796 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 CDX2Q99626 313 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-202ENST00000535689 ELOVL1Q9BW60 279 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 IFT27Q9BW83 186 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 CADM1Q9BY67 442 aaKnown RBP3.56□□□□□ -1.84
SNHG1-202ENST00000535689 SLITRK6Q9H5Y7 841 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 MIS18AQ9NYP9 233 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 RRN3Q9NYV6 651 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 FBXO40Q9UH90 709 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 FEM1BQ9UK73 627 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 GJD2Q9UKL4 321 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 TBX20Q9UMR3 447 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 GPR52Q9Y2T5 361 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 SLC45A1Q9Y2W3 748 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 CACNA1FO60840 1977 aa3.56□□□□□ -1.84
SNHG1-202ENST00000535689 MAPK8IP3Q9UPT6 1336 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 TCF20Q9UGU0 1960 aaKnown RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 GOLGA6L10A0A0M3HER8 536 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 TCRBV5S1A1TA0A578 114 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 PPP6CO00743 305 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 HOXC11O43248 304 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 CNTN5O94779 1100 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 NFATC1O95644 943 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 ERBB2P04626 1255 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 PCCAP05165 728 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 ALDOCP09972 364 aaKnown RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 CYP2A6P11509 494 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 PKMP14618 531 aaKnown RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 CHN1P15882 459 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 SFPQP23246 707 aaKnown RBP eCLIP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 PRKCHP24723 683 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms