RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 SLCO1B1Q9Y6L6 691 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 TBC1D3DA0A087WVF3 549 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 TBC1D3IA0A087WXS9 549 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 TBC1D3EA0A087X179 549 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 TBC1D3KA0A087X1G2 549 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 TBC1D3FA6NER0 549 aaPredicted RBP23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 C16orf96A6NNT2 1141 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 TBC1D3LB9A6J9 549 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 KHNYNO15037 678 aaKnown RBP23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 GJB3O75712 270 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 PIGNO95427 931 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 TBC1D3HP0C7X1 549 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 KRT10P13645 584 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 ADRB3P13945 408 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 PEX5P50542 639 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 RENBPP51606 427 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 PPP2CBP62714 309 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 PPP2CAP67775 309 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 LLGL1Q15334 1064 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 DUOXA1Q1HG43 343 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 TBC1D3GQ6DHY5 549 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 TBC1D3CQ6IPX1 549 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 NPNTQ6UXI9 565 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 TBC1D3Q8IZP1 549 aaPredicted RBP23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 RNF10Q8N5U6 811 aaKnown RBP23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 CEP76Q8TAP6 659 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 LRRN4Q8WUT4 740 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 SNX19Q92543 992 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 HDAC11Q96DB2 347 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 RBM41Q96IZ5 413 aaKnown RBP23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 NSMCE3Q96MG7 304 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 MIR1-1HGQ9H1L0 117 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 PREBQ9HCU5 417 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 HEY1Q9Y5J3 304 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 CAPN6Q9Y6Q1 641 aa23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 TNRC6BQ9UPQ9 1833 aaKnown RBP23.01■■□□□ 1.27
SFSWAP-204ENST00000535399 hCG_1818297A0A087WSY0 165 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 MATN3O15232 486 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 CR2P20023 1033 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 CCNCP24863 283 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 CD27P26842 260 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 HSPA9P38646 679 aaKnown RBP23■■□□□ 1.27
SFSWAP-204ENST00000535399 ABL2P42684 1182 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 DYNLT1P63172 113 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 IRX4P78413 519 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 HNRNPDQ14103 355 aaKnown RBP23■■□□□ 1.27
SFSWAP-204ENST00000535399 TFDP2Q14188 446 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 ZNF235Q14590 738 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 GRM3Q14832 879 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 TRIM61Q5EBN2 209 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 TFDP3Q5H9I0 405 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 MARC1Q5VT66 337 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 TIGD7Q6NT04 549 aaPredicted RBP23■■□□□ 1.27
SFSWAP-204ENST00000535399 SLC23A3Q6PIS1 610 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 NSMCE1Q8WV22 266 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 TUBGCP5Q96RT8 1024 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 MGME1Q9BQP7 344 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 EBF2Q9HAK2 575 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 RXFP3Q9NSD7 469 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 DKK3Q9UBP4 350 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 SUSD2Q9UGT4 822 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 CFAP54Q96N23 3096 aa23■■□□□ 1.27
SFSWAP-204ENST00000535399 CCDC66A2RUB6 948 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 LATO43561 262 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 FOXD2O60548 495 aaPredicted RBP22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 MMP13P45452 471 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 ADCY2Q08462 1091 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 PPP2R5EQ16537 467 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 KAZNQ674X7 775 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 FBXL19Q6PCT2 694 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 ZNF662Q6ZS27 426 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 RABEPKQ7Z6M1 372 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 TRIM69Q86WT6 500 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 SYCE1Q8N0S2 351 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 BBS5Q8N3I7 341 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 ZCCHC9Q8N567 271 aaKnown RBP22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 C12orf50Q8NA57 414 aaPredicted RBP22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 ALG3Q92685 438 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 ZNF830Q96NB3 372 aaPredicted RBP22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 OLFM3Q96PB7 478 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 SUV39H2Q9H5I1 410 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 CAPN10Q9HC96 672 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 AMFRQ9UKV5 643 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 TPX2Q9ULW0 747 aaKnown RBP22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 FADS3Q9Y5Q0 445 aa22.99■■□□□ 1.27
SFSWAP-204ENST00000535399 A0A1B0GTW7 788 aa22.98■■□□□ 1.27
SFSWAP-204ENST00000535399 A0A1W2PPC4 97 aa22.98■■□□□ 1.27
SFSWAP-204ENST00000535399 TSPAN11A1L157 253 aa22.98■■□□□ 1.27
SFSWAP-204ENST00000535399 TTC24A2A3L6 582 aaPredicted RBP22.98■■□□□ 1.27
SFSWAP-204ENST00000535399 BCAT2O15382 392 aaPredicted RBP22.98■■□□□ 1.27
SFSWAP-204ENST00000535399 SPINT1O43278 529 aa22.98■■□□□ 1.27
SFSWAP-204ENST00000535399 AP1G1O43747 822 aa22.98■■□□□ 1.27
SFSWAP-204ENST00000535399 KRT86O43790 486 aa22.98■■□□□ 1.27
SFSWAP-204ENST00000535399 CST8O60676 142 aa22.98■■□□□ 1.27
SFSWAP-204ENST00000535399 FTCDO95954 541 aa22.98■■□□□ 1.27
SFSWAP-204ENST00000535399 CFIP05156 583 aa22.98■■□□□ 1.27
SFSWAP-204ENST00000535399 SERPINF2P08697 491 aa22.98■■□□□ 1.27
SFSWAP-204ENST00000535399 CCDC175P0C221 793 aa22.98■■□□□ 1.27
SFSWAP-204ENST00000535399 GNSP15586 552 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms