RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 TFRCP02786 760 aaKnown RBP3.79□□□□□ -1.8
USP48-215ENST00000534705 KLKB1P03952 638 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 HOXB9P17482 250 aaPredicted RBP3.79□□□□□ -1.8
USP48-215ENST00000534705 PTMSP20962 102 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 PRPH2P23942 346 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 CIITAP33076 1130 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 POLD2P49005 469 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 GALNT3Q14435 633 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 RPS6KA2Q15349 733 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 ZNF628Q5EBL2 1059 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 TOM1L2Q6ZVM7 507 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 RBMXL3Q8N7X1 1067 aaKnown RBP3.79□□□□□ -1.8
USP48-215ENST00000534705 VPS37AQ8NEZ2 397 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 OR6Y1Q8NGX8 325 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 TRAPPC12Q8WVT3 735 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 THAP4Q8WY91 577 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 KAT2AQ92830 837 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 EME1Q96AY2 570 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 C3orf49Q96BT1 292 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 EVI5LQ96CN4 794 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 THOC3Q96J01 351 aaKnown RBP3.79□□□□□ -1.8
USP48-215ENST00000534705 ADAD1Q96M93 576 aaKnown RBP3.79□□□□□ -1.8
USP48-215ENST00000534705 TRAPPC9Q96Q05 1148 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 CTAGE1Q96RT6 745 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 TWSG1Q9GZX9 223 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 BRD8Q9H0E9 1235 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 HIPK2Q9H2X6 1198 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 PANK3Q9H999 370 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 SAYSD1Q9NPB0 183 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 TXLNGQ9NUQ3 528 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 POLKQ9UBT6 870 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 BAG5Q9UL15 447 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 PNMA2Q9UL42 364 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 COG5Q9UP83 839 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 LAMB4A4D0S4 1761 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 NPC1L1Q9UHC9 1359 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 CACNA1FO60840 1977 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 CGNL1Q0VF96 1302 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 TMEM272A0A1B0GTI8 110 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 hCG_1642624A0A1W2PR95 340 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 CXorf65A6NEN9 183 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 FAM90A20PA6NIJ5 464 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 A6NNC1 897 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 H0Y3Z8 333 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 H3BNX3 289 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 GRM8O00222 908 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 NPHP1O15259 732 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 FAM155BO75949 473 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 HLA-DQA2P01906 255 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 CHRNA5P30532 468 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 RASSF2P50749 326 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 NANOS2P60321 138 aaKnown RBP3.78□□□□□ -1.8
USP48-215ENST00000534705 CALD1Q05682 793 aaKnown RBP3.78□□□□□ -1.8
USP48-215ENST00000534705 SMAD1Q15797 465 aaKnown RBP3.78□□□□□ -1.8
USP48-215ENST00000534705 PRTGQ2VWP7 1150 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 PLK5Q496M5 336 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 GXYLT1Q4G148 440 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 ALG10Q5BKT4 473 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 ALG10BQ5I7T1 473 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 DAB2IPQ5VWQ8 1189 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 LVRNQ6Q4G3 990 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 RASGRP2Q7LDG7 609 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 IGFN1Q86VF2 1251 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 TMEM200AQ86VY9 491 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 FAM185AQ8N0U4 392 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 NME8Q8N427 588 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 PAF1Q8N7H5 531 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 SLC25A28Q96A46 364 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 FRG2BQ96QU4 278 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 GRHPRQ9UBQ7 328 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 SWAP70Q9UH65 585 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 SRP68Q9UHB9 627 aaKnown RBP3.78□□□□□ -1.8
USP48-215ENST00000534705 ANAPC4Q9UJX5 808 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 PCDHA10Q9Y5I2 948 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 SQORQ9Y6N5 450 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 NUP98P52948 1817 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 BCORQ6W2J9 1755 aa3.78□□□□□ -1.8
USP48-215ENST00000534705 SBF1O95248 1867 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 RNF123Q5XPI4 1314 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 N4BP2Q86UW6 1770 aaPredicted RBP3.77□□□□□ -1.81
USP48-215ENST00000534705 DLEC1Q9Y238 1755 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 NPIPB13A6NJU9 1138 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 NPIPB5A8MRT5 1133 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 NPIPB4C9JG80 1138 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 SEPT4O43236 478 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 CRYABP02511 175 aaKnown RBP3.77□□□□□ -1.81
USP48-215ENST00000534705 CYP21A2P08686 494 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 PEPDP12955 493 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 PKMP14618 531 aaKnown RBP3.77□□□□□ -1.81
USP48-215ENST00000534705 GRK6P43250 576 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 AMPHP49418 695 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 PGGT1BP53609 377 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 CDK18Q07002 472 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 PMPCAQ10713 525 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 TRIM14Q14142 442 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 PTGR1Q14914 329 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 TUBB8Q3ZCM7 444 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 WDR78Q5VTH9 848 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 SLC30A9Q6PML9 568 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 CLEC4GQ6UXB4 293 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms