RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 IRAK1P51617 712 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 BST2Q10589 180 aaKnown RBP10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 ERV3-1Q14264 604 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 INPP5JQ15735 1006 aaPredicted RBP10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 ALG11Q2TAA5 492 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 C1orf220Q5T0J3 134 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 CERCAMQ5T4B2 595 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 DCAF12Q5T6F0 453 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 CEP135Q66GS9 1140 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 LVRNQ6Q4G3 990 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 ENPP7Q6UWV6 458 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 DPY19L3Q6ZPD9 716 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 TMEM135Q86UB9 458 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 MCEMP1Q8IX19 187 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 SLC34A3Q8N130 599 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 CCDC150Q8NCX0 1101 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 CCDC112Q8NEF3 446 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 GPR156Q8NFN8 814 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 SLC39A13Q96H72 371 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 TBATAQ96M53 351 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 SERPINB11Q96P15 392 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 SLC4A5Q9BY07 1137 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 MUC3BQ9H195 1237 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 RRN3Q9NYV6 651 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 KCTD3Q9Y597 815 aa10.36□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 EIF5BO60841 1220 aaKnown RBP10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 RFPL1O75677 317 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 GABBR2O75899 941 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 FYNP06241 537 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 FURINP09958 794 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 TRIM49P0CI25 452 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 TRIM49CP0CI26 452 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 MAP4P27816 1152 aaKnown RBP10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 CASP1P29466 404 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 CSTF2P33240 577 aaKnown RBP eCLIP10.35□□□□□ -0.758e-15■■■■□ 21.9
NEDD8-MDP1-202ENST00000534348 B4GALNT1Q00973 533 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 MC1RQ01726 317 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 KNOP1Q1ED39 458 aaKnown RBP10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 ZXDCQ2QGD7 858 aaPredicted RBP10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 LRRC73Q5JTD7 316 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 NKAIN2Q5VXU1 208 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 PARS2Q7L3T8 475 aaKnown RBP10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 TAF8Q7Z7C8 310 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 TAC4Q86UU9 113 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 C12orf56Q8IXR9 622 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 TTC13Q8NBP0 860 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 CENPTQ96BT3 561 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 RPRD1AQ96P16 312 aaPredicted RBP10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 EFHD1Q9BUP0 239 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 DDA1Q9BW61 102 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 ASPSCR1Q9BZE9 553 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 DPEP2Q9H4A9 486 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 ZSCAN16Q9H4T2 348 aaPredicted RBP10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 CYP4F12Q9HCS2 524 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 SLC5A6Q9Y289 635 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 OAS3Q9Y6K5 1087 aaKnown RBP10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 WASF2Q9Y6W5 498 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 SHANK1Q9Y566 2161 aa10.35□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 DCHS2Q6V1P9 2916 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 SPG11Q96JI7 2443 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 SYNJ2BP-COX16A0A087WUM0 186 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 TCAF2A6NFQ2 919 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 HGSO14964 777 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 MMP20O60882 483 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 RASGRP1O95267 797 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 F8A1P23610 371 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 L1CAMP32004 1257 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 GKP32189 559 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 GGCXP38435 758 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 ABL2P42684 1182 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 PPM1FP49593 454 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 VASPP50552 380 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 SRP54P61011 504 aaKnown RBP10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 YPEL5P62699 121 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 NR6A1Q15406 480 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 EDRF1Q3B7T1 1238 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 C14orf28Q4W4Y0 310 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 RABGAP1LQ5R372 815 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 SYPL2Q5VXT5 272 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 KCTD16Q68DU8 428 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 SP5Q6BEB4 398 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 PMF1Q6P1K2 205 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 AGBL5Q8NDL9 886 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 DENND6BQ8NEG7 585 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 KCTD13Q8WZ19 329 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 FAM149B1Q96BN6 582 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 PPP1R9BQ96SB3 815 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 MFRPQ9BY79 579 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 BACH2Q9BYV9 841 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 SLC29A3Q9BZD2 475 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 COX16Q9P0S2 106 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 HS3ST2Q9Y278 367 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 PCDHB3Q9Y5E6 796 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 SRPRBQ9Y5M8 271 aaKnown RBP10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 MED13LQ71F56 2210 aa10.34□□□□□ -0.75
NEDD8-MDP1-202ENST00000534348 CDC14CA4D256 554 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 IKBKBO14920 756 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 TSPAN6O43657 245 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 KRT86O43790 486 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 KATNA1O75449 491 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms