RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	SPATA31A7	Q8IWB4	1347 aa		4.94	□□□□□ -1.62
ATM-223	ENST00000533979	PREX1	Q8TCU6	1659 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	SLC38A8	A6NNN8	435 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.93	□□□□□ -1.62
ATM-223	ENST00000533979		H0Y626	953 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	INPPL1	O15357	1258 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	INSIG1	O15503	277 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	ZSCAN9	O15535	394 aa	Predicted RBP	4.93	□□□□□ -1.62
ATM-223	ENST00000533979	SEPT4	O43236	478 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	SLC7A4	O43246	635 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	TNFSF14	O43557	240 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	TULP3	O75386	442 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	CER1	O95813	267 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	PLAU	P00749	431 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	FAM200B	P0CF97	657 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	ALAD	P13716	330 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	CPA2	P48052	419 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	PPP5C	P53041	499 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	BPIFB3	P59826	476 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	YPEL5	P62699	121 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	PPARD	Q03181	441 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	TDG	Q13569	410 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	CSHL1	Q14406	222 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	CNGA3	Q16281	694 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	PKN2	Q16513	984 aa	Known RBP	4.93	□□□□□ -1.62
ATM-223	ENST00000533979	KYNU	Q16719	465 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	CBWD5	Q5RIA9	395 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	ZNF449	Q6P9G9	518 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	SYNE3	Q6ZMZ3	975 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	SLFN11	Q7Z7L1	901 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	KIF27	Q86VH2	1401 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	CEP97	Q8IW35	865 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	ANKRD44	Q8N8A2	993 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	OR8H1	Q8NGG4	311 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	GOT1L1	Q8NHS2	421 aa	Predicted RBP	4.93	□□□□□ -1.62
ATM-223	ENST00000533979	NSMCE1	Q8WV22	266 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	IGFBPL1	Q8WX77	278 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	RBM17	Q96I25	401 aa	Known RBP	4.93	□□□□□ -1.62
ATM-223	ENST00000533979	GATA5	Q9BWX5	397 aa	Predicted RBP	4.93	□□□□□ -1.62
ATM-223	ENST00000533979	RNF26	Q9BY78	433 aa	Predicted RBP	4.93	□□□□□ -1.62
ATM-223	ENST00000533979	INTS2	Q9H0H0	1204 aa	Known RBP	4.93	□□□□□ -1.62
ATM-223	ENST00000533979	TAOK3	Q9H2K8	898 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	STN1	Q9H668	368 aa	Known RBP	4.93	□□□□□ -1.62
ATM-223	ENST00000533979	XAB2	Q9HCS7	855 aa	Known RBP	4.93	□□□□□ -1.62
ATM-223	ENST00000533979	PDE7B	Q9NP56	450 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	ABHD10	Q9NUJ1	306 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	ARL8B	Q9NVJ2	186 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	PPP1R14D	Q9NXH3	145 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	HEY2	Q9UBP5	337 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.93	□□□□□ -1.62
ATM-223	ENST00000533979	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.93	□□□□□ -1.62
ATM-223	ENST00000533979	FANCA	O15360	1455 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	FLT1	P17948	1338 aa		4.93	□□□□□ -1.62
ATM-223	ENST00000533979	RRH	O14718	337 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	TGFB1I1	O43294	461 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	ADAM20	O43506	726 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	HTATSF1	O43719	755 aa	Known RBP	4.92	□□□□□ -1.62
ATM-223	ENST00000533979	CSPG5	O95196	566 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	QDPR	P09417	244 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	MATN1	P21941	496 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	ATP5D	P30049	168 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	GRK5	P34947	590 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	GARS	P41250	739 aa	Known RBP	4.92	□□□□□ -1.62
ATM-223	ENST00000533979	MSH2	P43246	934 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	RAD23A	P54725	363 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	TBL3	Q12788	808 aa	Known RBP	4.92	□□□□□ -1.62
ATM-223	ENST00000533979	PRPF4B	Q13523	1007 aa	Known RBP	4.92	□□□□□ -1.62
ATM-223	ENST00000533979	KPNB1	Q14974	876 aa	Known RBP	4.92	□□□□□ -1.62
ATM-223	ENST00000533979	TBRG1	Q3YBR2	411 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	ZNF260	Q3ZCT1	412 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	LEXM	Q3ZCV2	418 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	MSANTD2	Q6P1R3	559 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	DENND1B	Q6P3S1	775 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	ACSM6	Q6P461	480 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.92	□□□□□ -1.62
ATM-223	ENST00000533979	TECPR1	Q7Z6L1	1165 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	PIM3	Q86V86	326 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	CCDC105	Q8IYK2	499 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	SCML4	Q8N228	414 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	WDTC1	Q8N5D0	677 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	ARFGAP1	Q8N6T3	406 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	FSIP1	Q8NA03	581 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	MGARP	Q8TDB4	240 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	WIPF2	Q8TF74	440 aa	Predicted RBP	4.92	□□□□□ -1.62
ATM-223	ENST00000533979	SCFD2	Q8WU76	684 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	JAKMIP2	Q96AA8	810 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	ELP4	Q96EB1	424 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	MCRS1	Q96EZ8	462 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	PERP	Q96FX8	193 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	FCRL5	Q96RD9	977 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	WAC	Q9BTA9	647 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	HERC2P3	Q9BVR0	1158 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
ATM-223	ENST00000533979	XPO4	Q9C0E2	1151 aa	Known RBP	4.92	□□□□□ -1.62
ATM-223	ENST00000533979	FOXP1	Q9H334	677 aa	Predicted RBP	4.92	□□□□□ -1.62
ATM-223	ENST00000533979	ERVMER34-1	Q9H9K5	563 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.92	□□□□□ -1.62
ATM-223	ENST00000533979	GTF3C4	Q9UKN8	822 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	SARDH	Q9UL12	918 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms