RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 INO80DQ53TQ3 878 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 ZNF569Q5MCW4 686 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 AGBL4Q5VU57 503 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 NEK5Q6P3R8 708 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 MFSD7Q6UXD7 560 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 LINGO4Q6UY18 593 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 SPOCD1Q6ZMY3 1216 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 NETO2Q8NC67 525 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 OR14C36Q8NHC7 312 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 EXD1Q8NHP7 514 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 CASKIN2Q8WXE0 1202 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 TSC1Q92574 1164 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 HMCESQ96FZ2 354 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 LRIG1Q96JA1 1093 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 GTPBP2Q9BX10 602 aaKnown RBP13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 ETNK2Q9NVF9 386 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 MFHAS1Q9Y4C4 1052 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 TBC1D3DA0A087WVF3 549 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 TBC1D3IA0A087WXS9 549 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 TBC1D3EA0A087X179 549 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 TBC1D3KA0A087X1G2 549 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 TBC1D3FA6NER0 549 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 USP27XA6NNY8 438 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 TBC1D3LB9A6J9 549 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 APOL1O14791 398 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 CER1O95813 267 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 TBC1D3HP0C7X1 549 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 CSNK1EP49674 416 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 NOVA1P51513 510 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 NDST2P52849 883 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 METAP1P53582 386 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 BNC1Q01954 994 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 CNTN1Q12860 1018 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 UAP1L1Q3KQV9 507 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 PARP15Q460N3 678 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 CARD16Q5EG05 197 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 CCDC181Q5TID7 509 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 TBC1D3GQ6DHY5 549 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 TBC1D3CQ6IPX1 549 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 DBX2Q6ZNG2 339 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 DPY19L3Q6ZPD9 716 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 TRIM69Q86WT6 500 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 TBC1D3Q8IZP1 549 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 LZTR1Q8N653 840 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 PCDH19Q8TAB3 1148 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 FAM71BQ8TC56 605 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 SNX19Q92543 992 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 SKA1Q96BD8 255 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 RNF157Q96PX1 679 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 HEPHQ9BQS7 1158 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 HDAC8Q9BY41 377 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 SLC32A1Q9H598 525 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 NOL6Q9H6R4 1146 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 PREBQ9HCU5 417 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 FSCN3Q9NQT6 498 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 IL36AQ9UHA7 158 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 SLCO1B1Q9Y6L6 691 aa13.15□□□□□ -0.3
TRAPPC4-212ENST00000533058 ASCC3Q8N3C0 2202 aaKnown RBP13.15□□□□□ -0.31
TRAPPC4-212ENST00000533058 FAM47DPA6NHR8 397 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 C3orf70A6NLC5 250 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 ZNF487B1APH4 448 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 VILLO15195 856 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 DFNA5O60443 496 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 GSRP00390 522 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 KRT10P13645 584 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 CD59P13987 128 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 ZFXP17010 805 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 IL4RP24394 825 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 CDKN2BP42772 138 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 PAPOLAP51003 745 aaKnown RBP13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 ZNF211Q13398 564 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 SERINC3Q13530 473 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 TFDP2Q14188 446 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 TFDP3Q5H9I0 405 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 PIP5KL1Q5T9C9 394 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 N4BP2L1Q5TBK1 243 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 LEKR1Q6ZMV7 388 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 VSIG1Q86XK7 387 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 NPWQ8N729 165 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 CHST14Q8NCH0 376 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 ALG3Q92685 438 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 PPP1R16AQ96I34 528 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 HEMGNQ9BXL5 484 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 SLC39A8Q9C0K1 460 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 EBF2Q9HAK2 575 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 SP110Q9HB58 689 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 DMTF1Q9Y222 760 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 PCDHGB2Q9Y5G2 931 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 HEY1Q9Y5J3 304 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 WASF2Q9Y6W5 498 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 CHD5Q8TDI0 1954 aa13.14□□□□□ -0.31
TRAPPC4-212ENST00000533058 A0A1B0GVT2 93 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 KPNA3O00505 521 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 DDX3YO15523 660 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 MFSD11O43934 449 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 BNIP3LO60238 219 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 RNGTTO60942 597 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 LEFTY1O75610 366 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 MAP3K6O95382 1288 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms