RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 ZNF542PQ5EBM4 170 aa23.35■■□□□ 1.33
LTBP3-220ENST00000532661 GDPD4Q6W3E5 623 aa23.35■■□□□ 1.33
LTBP3-220ENST00000532661 UMODL1-AS1Q8N2C9 162 aa23.35■■□□□ 1.33
LTBP3-220ENST00000532661 GDAP1L1Q96MZ0 367 aa23.35■■□□□ 1.33
LTBP3-220ENST00000532661 PCSK1NQ9UHG2 260 aa23.35■■□□□ 1.33
LTBP3-220ENST00000532661 AP4E1Q9UPM8 1137 aa23.35■■□□□ 1.33
LTBP3-220ENST00000532661 HS3ST3A1Q9Y663 406 aa23.35■■□□□ 1.33
LTBP3-220ENST00000532661 TMEM191CA6NGB0 347 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 A6NNZ2 444 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 NEMP1O14524 444 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 INSIG1O15503 277 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 SIGLEC6O43699 453 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 SERPINC1P01008 464 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 PRKCIP41743 596 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 RHOAP61586 193 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 KLHL30Q0D2K2 578 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 CYTH1Q15438 398 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 PARP15Q460N3 678 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 INO80DQ53TQ3 878 aaPredicted RBP23.34■■□□□ 1.33
LTBP3-220ENST00000532661 PPP1R2P3Q6NXS1 205 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 PTAR1Q7Z6K3 402 aaPredicted RBP23.34■■□□□ 1.33
LTBP3-220ENST00000532661 RAB7BQ96AH8 199 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 CELF6Q96J87 481 aaKnown RBP23.34■■□□□ 1.33
LTBP3-220ENST00000532661 EXOC2Q96KP1 924 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 KLF6Q99612 283 aaPredicted RBP23.34■■□□□ 1.33
LTBP3-220ENST00000532661 C1QTNF2Q9BXJ5 285 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 OSBPL1AQ9BXW6 950 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 DHX35Q9H5Z1 703 aaKnown RBP23.34■■□□□ 1.33
LTBP3-220ENST00000532661 LRRC19Q9H756 370 aa23.34■■□□□ 1.33
LTBP3-220ENST00000532661 PKD1L2Q7Z442 2459 aa23.33■■□□□ 1.33
LTBP3-220ENST00000532661 J3KR12 359 aa23.33■■□□□ 1.33
LTBP3-220ENST00000532661 FGF10O15520 208 aaPredicted RBP23.33■■□□□ 1.33
LTBP3-220ENST00000532661 TSPAN6O43657 245 aa23.33■■□□□ 1.33
LTBP3-220ENST00000532661 IGSF6O95976 241 aa23.33■■□□□ 1.33
LTBP3-220ENST00000532661 DESP17661 470 aa23.33■■□□□ 1.33
LTBP3-220ENST00000532661 SGCGQ13326 291 aa23.33■■□□□ 1.33
LTBP3-220ENST00000532661 PROX2Q3B8N5 592 aa23.33■■□□□ 1.33
LTBP3-220ENST00000532661 CASKIN2Q8WXE0 1202 aa23.33■■□□□ 1.33
LTBP3-220ENST00000532661 KCTD15Q96SI1 283 aaPredicted RBP23.33■■□□□ 1.33
LTBP3-220ENST00000532661 SNRNP25Q9BV90 132 aaKnown RBP23.33■■□□□ 1.33
LTBP3-220ENST00000532661 CBX8Q9HC52 389 aa23.33■■□□□ 1.33
LTBP3-220ENST00000532661 LHX3Q9UBR4 397 aa23.33■■□□□ 1.33
LTBP3-220ENST00000532661 CNOT8Q9UFF9 292 aaKnown RBP23.33■■□□□ 1.33
LTBP3-220ENST00000532661 SYCE3A1L190 88 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 EEF2KO00418 725 aaKnown RBP23.32■■□□□ 1.32
LTBP3-220ENST00000532661 AREL1O15033 823 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 FFAR2O15552 330 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 PIAS2O75928 621 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 GIMD1P0DJR0 217 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 GZMAP12544 262 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 CKMT2P17540 419 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 TPRG1LQ5T0D9 272 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 ERMARDQ5T6L9 678 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 KYAT3Q6YP21 454 aaKnown RBP23.32■■□□□ 1.32
LTBP3-220ENST00000532661 CYP4V2Q6ZWL3 525 aaPredicted RBP23.32■■□□□ 1.32
LTBP3-220ENST00000532661 TTC7BQ86TV6 843 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 TMPRSS12Q86WS5 348 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 LENG8Q96PV6 779 aaPredicted RBP23.32■■□□□ 1.32
LTBP3-220ENST00000532661 SLC39A8Q9C0K1 460 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 PDFQ9HBH1 243 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 GPR27Q9NS67 375 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 MYO1AQ9UBC5 1043 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 UBA2Q9UBT2 640 aaPredicted RBP23.32■■□□□ 1.32
LTBP3-220ENST00000532661 MFHAS1Q9Y4C4 1052 aa23.32■■□□□ 1.32
LTBP3-220ENST00000532661 C1SP09871 688 aa23.31■■□□□ 1.32
LTBP3-220ENST00000532661 TIMP2P16035 220 aa23.31■■□□□ 1.32
LTBP3-220ENST00000532661 MIPP30301 263 aa23.31■■□□□ 1.32
LTBP3-220ENST00000532661 PAPOLAP51003 745 aaKnown RBP23.31■■□□□ 1.32
LTBP3-220ENST00000532661 NDST2P52849 883 aa23.31■■□□□ 1.32
LTBP3-220ENST00000532661 RAD51Q06609 339 aa23.31■■□□□ 1.32
LTBP3-220ENST00000532661 CYP4F3Q08477 520 aa23.31■■□□□ 1.32
LTBP3-220ENST00000532661 ZNF211Q13398 564 aaPredicted RBP23.31■■□□□ 1.32
LTBP3-220ENST00000532661 FZD2Q14332 565 aa23.31■■□□□ 1.32
LTBP3-220ENST00000532661 LUZP1Q86V48 1076 aa23.31■■□□□ 1.32
LTBP3-220ENST00000532661 ZNF653Q96CK0 615 aa23.31■■□□□ 1.32
LTBP3-220ENST00000532661 EDEM3Q9BZQ6 932 aa23.31■■□□□ 1.32
LTBP3-220ENST00000532661 DNAJC28Q9NX36 388 aa23.31■■□□□ 1.32
LTBP3-220ENST00000532661 FPGTO14772 594 aa23.3■■□□□ 1.32
LTBP3-220ENST00000532661 MMP20O60882 483 aa23.3■■□□□ 1.32
LTBP3-220ENST00000532661 RNF8O76064 485 aa23.3■■□□□ 1.32
LTBP3-220ENST00000532661 PIGNO95427 931 aa23.3■■□□□ 1.32
LTBP3-220ENST00000532661 JUPP14923 745 aa23.3■■□□□ 1.32
LTBP3-220ENST00000532661 HTR7P34969 479 aa23.3■■□□□ 1.32
LTBP3-220ENST00000532661 OR4C6Q8NH72 309 aa23.3■■□□□ 1.32
LTBP3-220ENST00000532661 FAM174AQ8TBP5 190 aa23.3■■□□□ 1.32
LTBP3-220ENST00000532661 ARID1BQ8NFD5 2236 aaPredicted RBP23.3■■□□□ 1.32
LTBP3-220ENST00000532661 ANKRD11Q6UB99 2663 aaPredicted RBP23.3■■□□□ 1.32
LTBP3-220ENST00000532661 TRPM6Q9BX84 2022 aa23.3■■□□□ 1.32
LTBP3-220ENST00000532661 SPTY2D1-AS1A0A0U1RR47 76 aa23.29■■□□□ 1.32
LTBP3-220ENST00000532661 PRAMEF11O60813 436 aa23.29■■□□□ 1.32
LTBP3-220ENST00000532661 MYF5P13349 255 aa23.29■■□□□ 1.32
LTBP3-220ENST00000532661 FANCCQ00597 558 aa23.29■■□□□ 1.32
LTBP3-220ENST00000532661 PPP6R3Q5H9R7 873 aaPredicted RBP23.29■■□□□ 1.32
LTBP3-220ENST00000532661 HES3Q5TGS1 186 aa23.29■■□□□ 1.32
LTBP3-220ENST00000532661 DCP2Q8IU60 420 aaKnown RBP23.29■■□□□ 1.32
LTBP3-220ENST00000532661 FNIP1Q8TF40 1166 aa23.29■■□□□ 1.32
LTBP3-220ENST00000532661 ASB12Q8WXK4 309 aa23.29■■□□□ 1.32
LTBP3-220ENST00000532661 IFT43Q96FT9 208 aa23.29■■□□□ 1.32
LTBP3-220ENST00000532661 KLF15Q9UIH9 416 aa23.29■■□□□ 1.32
LTBP3-220ENST00000532661 RAXQ9Y2V3 346 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms