RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PAPOLAP51003 745 aaKnown RBP17.48■□□□□ 0.39
PHRF1-204ENST00000532550 SGCGQ13326 291 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 CYTH1Q15438 398 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 ALKBH5Q6P6C2 394 aaKnown RBP17.48■□□□□ 0.39
PHRF1-204ENST00000532550 RAB44Q7Z6P3 723 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-204ENST00000532550 TTC7BQ86TV6 843 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 ZSCAN30Q86W11 494 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 SPATS2Q86XZ4 545 aaKnown RBP17.48■□□□□ 0.39
PHRF1-204ENST00000532550 TMEM145Q8NBT3 493 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 SAP25Q8TEE9 199 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 ARHGEF26Q96DR7 871 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 THAP2Q9H0W7 228 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 TSPY26PQ9H489 355 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 ZWILCHQ9H900 591 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 MSRB2Q9Y3D2 182 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 MFHAS1Q9Y4C4 1052 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 HS3ST3A1Q9Y663 406 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 J3KR12 359 aa17.47■□□□□ 0.39
PHRF1-204ENST00000532550 PRAMEF11O60813 436 aa17.47■□□□□ 0.39
PHRF1-204ENST00000532550 ATXN1LP0C7T5 689 aaKnown RBP17.47■□□□□ 0.39
PHRF1-204ENST00000532550 BNIP3Q12983 259 aa17.47■□□□□ 0.39
PHRF1-204ENST00000532550 SHBQ15464 509 aa17.47■□□□□ 0.39
PHRF1-204ENST00000532550 ST3GAL2Q16842 350 aa17.47■□□□□ 0.39
PHRF1-204ENST00000532550 TMEM259Q4ZIN3 620 aa17.47■□□□□ 0.39
PHRF1-204ENST00000532550 FAM174AQ8TBP5 190 aa17.47■□□□□ 0.39
PHRF1-204ENST00000532550 NUP85Q9BW27 656 aa17.47■□□□□ 0.39
PHRF1-204ENST00000532550 CPEB1Q9BZB8 566 aaKnown RBP17.47■□□□□ 0.39
PHRF1-204ENST00000532550 FZD3Q9NPG1 666 aa17.47■□□□□ 0.39
PHRF1-204ENST00000532550 CWC15Q9P013 229 aaKnown RBP17.47■□□□□ 0.39
PHRF1-204ENST00000532550 FTSJ1Q9UET6 329 aa17.47■□□□□ 0.39
PHRF1-204ENST00000532550 IP6K2Q9UHH9 426 aa17.47■□□□□ 0.39
PHRF1-204ENST00000532550 KLK13Q9UKR3 277 aa17.47■□□□□ 0.39
PHRF1-204ENST00000532550 MYO1FO00160 1098 aa17.46■□□□□ 0.39
PHRF1-204ENST00000532550 DFFAO00273 331 aa17.46■□□□□ 0.39
PHRF1-204ENST00000532550 PALMO75781 387 aa17.46■□□□□ 0.39
PHRF1-204ENST00000532550 CYP1A2P05177 515 aa17.46■□□□□ 0.39
PHRF1-204ENST00000532550 EPHA8P29322 1005 aaPredicted RBP17.46■□□□□ 0.39
PHRF1-204ENST00000532550 ARL4AP40617 200 aa17.46■□□□□ 0.39
PHRF1-204ENST00000532550 TSR1Q2NL82 804 aaKnown RBP17.46■□□□□ 0.39
PHRF1-204ENST00000532550 UNQ6494/PRO21346Q6UXR6 183 aa17.46■□□□□ 0.39
PHRF1-204ENST00000532550 CYP4V2Q6ZWL3 525 aaPredicted RBP17.46■□□□□ 0.39
PHRF1-204ENST00000532550 LZTR1Q8N653 840 aa17.46■□□□□ 0.39
PHRF1-204ENST00000532550 HSPH1Q92598 858 aa17.46■□□□□ 0.39
PHRF1-204ENST00000532550 ANAPC7Q9UJX3 599 aa17.46■□□□□ 0.39
PHRF1-204ENST00000532550 CACNA1BQ00975 2339 aa17.46■□□□□ 0.38
PHRF1-204ENST00000532550 TDRD6O60522 2096 aaKnown RBP17.45■□□□□ 0.38
PHRF1-204ENST00000532550 FAM221BA6H8Z2 402 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 IGLON5A6NGN9 336 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 C1QTNF9BB2RNN3 333 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 H3BRJ5 948 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 INSIG1O15503 277 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 LDOC1O95751 146 aaPredicted RBP17.45■□□□□ 0.38
PHRF1-204ENST00000532550 PROS1P07225 676 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 C1QTNF9P0C862 333 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 XPAP23025 273 aaPredicted RBP17.45■□□□□ 0.38
PHRF1-204ENST00000532550 IL1R2P27930 398 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 HNRNPH3P31942 346 aaKnown RBP17.45■□□□□ 0.38
PHRF1-204ENST00000532550 ABL2P42684 1182 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 CLDN2P57739 230 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 GRM3Q14832 879 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 SMTNL2Q2TAL5 461 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 SPECC1LQ69YQ0 1117 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 DCP2Q8IU60 420 aaKnown RBP17.45■□□□□ 0.38
PHRF1-204ENST00000532550 EID2Q8N6I1 236 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 OR8K1Q8NGG5 319 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 HCAR2Q8TDS4 363 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 VOPP1Q96AW1 172 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 BTBD6Q96KE9 485 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 EXOC2Q96KP1 924 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 C1QTNF2Q9BXJ5 285 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 CALN1Q9BXU9 219 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 SP110Q9HB58 689 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 PDFQ9HBH1 243 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 KLHL11Q9NVR0 708 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 ZNHIT6Q9NWK9 470 aaKnown RBP17.45■□□□□ 0.38
PHRF1-204ENST00000532550 DKK3Q9UBP4 350 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 LHX3Q9UBR4 397 aa17.45■□□□□ 0.38
PHRF1-204ENST00000532550 KNTC1P50748 2209 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 GOLGA4Q13439 2230 aaKnown RBP17.44■□□□□ 0.38
PHRF1-204ENST00000532550 A6NNZ2 444 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 FPGTO14772 594 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 TPM1P09493 284 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 RARAP10276 462 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 TIMP2P16035 220 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 EIF4A3P38919 411 aaKnown RBP17.44■□□□□ 0.38
PHRF1-204ENST00000532550 SSR1P43307 286 aaKnown RBP17.44■□□□□ 0.38
PHRF1-204ENST00000532550 TRIM14Q14142 442 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 FGL2Q14314 439 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 DPYSL2Q16555 572 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 CCDC157Q569K6 752 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 AFMIDQ63HM1 303 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 GCNT7Q6ZNI0 430 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 Q6ZSR6 202 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 POLNQ7Z5Q5 900 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 ABI3BPQ7Z7G0 1075 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 NIPA2Q8N8Q9 360 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 OR13H1Q8NG92 308 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 ASB12Q8WXK4 309 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 CNDP2Q96KP4 475 aaKnown RBP17.44■□□□□ 0.38
PHRF1-204ENST00000532550 BMFQ96LC9 184 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms