RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 CNTN2Q02246 1040 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 NHLH1Q02575 133 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 CSHL1Q14406 222 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 KCNJ12Q14500 433 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 PPP2R5BQ15173 497 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 ERCC6LQ2NKX8 1250 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 P3H1Q32P28 736 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 FAM153CQ494X1 144 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 TANGO2Q6ICL3 276 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 MSANTD2Q6P1R3 559 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 KLHL17Q6TDP4 642 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.18□□□□□ -1.1
KNL1-209ENST00000532347 SLC16A11Q8NCK7 471 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 ARNTL2Q8WYA1 636 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 TBC1D5Q92609 795 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 MRPL38Q96DV4 380 aaKnown RBP8.18□□□□□ -1.1
KNL1-209ENST00000532347 RTKNQ9BST9 563 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 LMAN2LQ9H0V9 348 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 RANBP17Q9H2T7 1088 aaKnown RBP8.18□□□□□ -1.1
KNL1-209ENST00000532347 MLXIPQ9HAP2 919 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 SNX15Q9NRS6 342 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 DDX19BQ9UMR2 479 aa8.18□□□□□ -1.1
KNL1-209ENST00000532347 TMEM232C9JQI7 657 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 IPO5O00410 1097 aaKnown RBP8.17□□□□□ -1.1
KNL1-209ENST00000532347 ZNF213O14771 459 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 ACTL6BO94805 426 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 MYOGP15173 224 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 GSTM5P46439 218 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 CACNA2D1P54289 1103 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 POLE2P56282 527 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 CYP4F2P78329 520 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 LMAN2Q12907 356 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 POSTNQ15063 836 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 RNASE12Q5GAN4 147 aaKnown RBP8.17□□□□□ -1.1
KNL1-209ENST00000532347 NAPRTQ6XQN6 538 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 LRRC8DQ7L1W4 858 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 SFTPA1Q8IWL2 248 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 PNPLA1Q8N8W4 532 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 SIMC1Q8NDZ2 872 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 WDR60Q8WVS4 1066 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 RSC1A1Q92681 617 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 PABPC5Q96DU9 382 aaKnown RBP8.17□□□□□ -1.1
KNL1-209ENST00000532347 BBC3Q96PG8 261 aaPredicted RBP8.17□□□□□ -1.1
KNL1-209ENST00000532347 MACROD1Q9BQ69 325 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 FTOQ9C0B1 505 aaKnown RBP eCLIP8.17□□□□□ -1.1
KNL1-209ENST00000532347 IL1RAPL2Q9NP60 686 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 PRDM8Q9NQV8 689 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 SLC17A6Q9P2U8 582 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 DMRT1Q9Y5R6 373 aa8.17□□□□□ -1.1
KNL1-209ENST00000532347 CYP2D7A0A087X1C5 515 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 EPOPA6NHQ4 379 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 CTIFO43310 598 aaKnown RBP8.16□□□□□ -1.1
KNL1-209ENST00000532347 CER1O95813 267 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 RB1P06400 928 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 LCTP09848 1927 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 CASTP20810 708 aaKnown RBP8.16□□□□□ -1.1
KNL1-209ENST00000532347 TDO2P48775 406 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 SEMA3BQ13214 749 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 TIGD6Q17RP2 521 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 BTBD16Q32M84 506 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 HERC4Q5GLZ8 1057 aaPredicted RBP8.16□□□□□ -1.1
KNL1-209ENST00000532347 DENND2CQ68D51 928 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 CCDC144NLQ6NUI1 221 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 SLC29A4Q7RTT9 530 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 ADHFE1Q8IWW8 467 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 FBXO16Q8IX29 292 aaPredicted RBP8.16□□□□□ -1.1
KNL1-209ENST00000532347 OR6J1Q8NGC5 347 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 SCAMP5Q8TAC9 235 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 OTUD7AQ8TE49 926 aaPredicted RBP8.16□□□□□ -1.1
KNL1-209ENST00000532347 OVCA2Q8WZ82 227 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 TBC1D20Q96BZ9 403 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 PRR11Q96HE9 360 aaPredicted RBP8.16□□□□□ -1.1
KNL1-209ENST00000532347 IWS1Q96ST2 819 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 EIF3CQ99613 913 aaKnown RBP8.16□□□□□ -1.1
KNL1-209ENST00000532347 TIMP4Q99727 224 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 DUSP26Q9BV47 211 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 PABPC3Q9H361 631 aaKnown RBP8.16□□□□□ -1.1
KNL1-209ENST00000532347 BOLA2Q9H3K6 86 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 ECHDC1Q9NTX5 307 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 TCP11L1Q9NUJ3 509 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 MAP3K20Q9NYL2 800 aaKnown RBP8.16□□□□□ -1.1
KNL1-209ENST00000532347 ANAPC4Q9UJX5 808 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 TLK1Q9UKI8 766 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 CCPG1Q9ULG6 757 aa8.16□□□□□ -1.1
KNL1-209ENST00000532347 RALGAPA2Q2PPJ7 1873 aa8.15□□□□□ -1.1
KNL1-209ENST00000532347 LINC01553A4QN01 128 aa8.15□□□□□ -1.1
KNL1-209ENST00000532347 C5orf67F2Z3F1 127 aa8.15□□□□□ -1.1
KNL1-209ENST00000532347 GPAA1O43292 621 aa8.15□□□□□ -1.1
KNL1-209ENST00000532347 SUV39H1O43463 412 aa8.15□□□□□ -1.1
KNL1-209ENST00000532347 RPP40O75818 363 aaKnown RBP8.15□□□□□ -1.1
KNL1-209ENST00000532347 PSMC6P62333 389 aa8.15□□□□□ -1.1
KNL1-209ENST00000532347 IKQ13123 557 aaPredicted RBP8.15□□□□□ -1.1
KNL1-209ENST00000532347 DNASE1L3Q13609 305 aa8.15□□□□□ -1.1
KNL1-209ENST00000532347 PTGISQ16647 500 aa8.15□□□□□ -1.1
KNL1-209ENST00000532347 ATPAF1Q5TC12 328 aaPredicted RBP8.15□□□□□ -1.1
KNL1-209ENST00000532347 KIRREL2Q6UWL6 708 aa8.15□□□□□ -1.1
KNL1-209ENST00000532347 DEFB128Q7Z7B8 93 aa8.15□□□□□ -1.1
KNL1-209ENST00000532347 SLC44A2Q8IWA5 706 aaPredicted RBP8.15□□□□□ -1.1
KNL1-209ENST00000532347 CCDC117Q8IWD4 279 aaPredicted RBP8.15□□□□□ -1.1
KNL1-209ENST00000532347 GALNT15Q8N3T1 639 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms